RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC34A1Q06495 639 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 GPR176Q14439 515 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 SMN1Q16637 294 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 SATL1Q86VE3 508 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CNIH3Q8TBE1 160 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 TNFAIP8L1Q8WVP5 186 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CYGBQ8WWM9 190 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 THRSPQ92748 146 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 METTL9Q9H1A3 318 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 LINC00574Q9H8X3 128 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 MEGF11A6BM72 1044 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 H0YJX3 145 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 CSTBP04080 98 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 CD1AP06126 327 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 CSF1P09603 554 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 GZMHP20718 246 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 BDKRB2P30411 391 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF93P35789 620 aaPredicted RBP11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 RAB13P51153 203 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 OR4P4Q8NGL7 312 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 GHSRQ92847 366 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 VCXQ9H320 206 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 PLCXD1Q9NUJ7 323 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.53
NIF3L1-205ENST00000409588 GABRPO00591 440 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 CHST1O43916 411 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 PEX14O75381 377 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 CGB3P0DN86 165 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 CGB7P0DN87 165 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 SOX2P48431 317 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 ST3GAL4Q11206 333 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 Q499Y3 187 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 PAN3Q58A45 887 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 LDLRAD2Q5SZI1 272 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 DMKNQ6E0U4 476 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 CCBE1Q6UXH8 406 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 RNF144BQ7Z419 303 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 C8orf59Q8N0T1 100 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 OR9G1Q8NH87 305 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 RGP1Q92546 391 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 GGHQ92820 318 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 MRPS24Q96EL2 167 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 COQ2Q96H96 371 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
NIF3L1-205ENST00000409588 VWFP04275 2813 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 MEX3AA1L020 520 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 CASQ2O14958 399 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 MMP23AO75900 390 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 CAPGP40121 348 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 MNDAP41218 407 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 RIPK1Q13546 671 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 OSR2Q8N2R0 312 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 NR1H4Q96RI1 486 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 NKX3-1Q99801 234 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM192AQ9GZU8 254 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 SPACA1Q9HBV2 294 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 TAS2R4Q9NYW5 299 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 FOXJ3Q9UPW0 622 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 ST3GAL6Q9Y274 331 aa11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 AMMECR1Q9Y4X0 333 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-205ENST00000409588 MEIKINA0A087WXM9 373 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 NPIPB11E5RHQ5 1161 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 M0QZK8 103 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 HTR3BO95264 441 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 CLIC3O95833 236 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 GTF2F2P13984 249 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 IGFBP3P17936 291 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 PAX6P26367 422 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 DEFA6Q01524 100 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 ATXN7L3Q14CW9 347 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 RCN1Q15293 331 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 C17orf58Q2M2W7 97 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 HLA-DRB5Q30154 266 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 OGFRL1Q5TC84 451 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 RNLSQ5VYX0 342 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 XAF1Q6GPH4 301 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 THNSL2Q86YJ6 484 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms