RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RCL1Q9Y2P8 373 aaKnown RBP14.41□□□□□ -0.1
NUP50-203ENST00000407019 UBE2J1Q9Y385 318 aaPredicted RBP14.41□□□□□ -0.1
NUP50-203ENST00000407019 FAM96BQ9Y3D0 163 aa14.41□□□□□ -0.1
NUP50-203ENST00000407019 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 CDS2O95674 445 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 CTXN2P0C2S0 81 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 NOVA1P51513 510 aaKnown RBP14.4□□□□□ -0.1
NUP50-203ENST00000407019 F2RL1P55085 397 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 GNG3P63215 75 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 HERPUD1Q15011 391 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 FBXW9Q5XUX1 488 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 C5orf24Q7Z6I8 188 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 BCL2L2Q92843 193 aaPredicted RBP14.4□□□□□ -0.1
NUP50-203ENST00000407019 OR51B6Q9H340 312 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 ATP23Q9Y6H3 246 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 R4GN57 208 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 MUC3AQ02505 3323 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 TRGV5A0A0B4J1U4 118 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 LILRA1O75019 489 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 TGIF1Q15583 401 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 ATP1A1-AS1Q5TC04 95 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 SUMF2Q8NBJ7 301 aa14.4□□□□□ -0.1
NUP50-203ENST00000407019 RIMS4Q9H426 269 aaPredicted RBP14.4□□□□□ -0.1
NUP50-203ENST00000407019 FAM212BQ9NTI7 297 aaPredicted RBP14.4□□□□□ -0.1
NUP50-203ENST00000407019 SLC22A20A6NK97 555 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 TUSC2O75896 110 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 SNAPINO95295 136 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 ARG2P78540 354 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 GNMTQ14749 295 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 FAM122CQ6P4D5 195 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 ZNF818PQ6ZRF7 136 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 MDP1Q86V88 176 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 ZNF695Q8IW36 515 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 DMBX1Q8NFW5 382 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 GTF3AQ92664 365 aaKnown RBP14.39□□□□□ -0.11
NUP50-203ENST00000407019 ZNF488Q96MN9 340 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 TMEM56Q96MV1 263 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 SPIN2AQ99865 258 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 SPIN2BQ9BPZ2 258 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 USB1Q9BQ65 265 aaKnown RBP14.39□□□□□ -0.11
NUP50-203ENST00000407019 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 TMEM9BQ9NQ34 198 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 SPRR3Q9UBC9 169 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 TMEM56-RWDD3S4R434 201 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 WDFY4Q6ZS81 3184 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 AHCTF1Q8WYP5 2266 aa14.39□□□□□ -0.11
NUP50-203ENST00000407019 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 ARGFXA6NJG6 315 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 RNASEK-C17orf49H0YIS7 233 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 SEC11BP0C7V7 166 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 IL24Q13007 206 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 ZNF766Q5HY98 468 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 GAPTQ8N292 157 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 MRPL30Q8TCC3 161 aaKnown RBP14.38□□□□□ -0.11
NUP50-203ENST00000407019 WNT2BQ93097 391 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 GINS3Q9BRX5 216 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 ADAT1Q9BUB4 502 aaKnown RBP14.38□□□□□ -0.11
NUP50-203ENST00000407019 PKIBQ9C010 78 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 IGKV1D-13A0A0B4J2D9 117 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 ATP6V1G2-DDX39BF2Z307 99 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 SLC34A2O95436 690 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 IGKV1-13P0DP09 117 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 CTRB1P17538 263 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 CTRB2Q6GPI1 263 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 OR2T2Q6IF00 324 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 GP6Q9HCN6 339 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 LHX6Q9UPM6 363 aa14.38□□□□□ -0.11
NUP50-203ENST00000407019 IGKV1-6A0A0C4DH72 117 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 AGPAT2O15120 278 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 SPINK2P20155 84 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 IL32P24001 234 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 ID4P47928 161 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 RNFT1Q5M7Z0 435 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 SELENOHQ8IZQ5 122 aaKnown RBP14.37□□□□□ -0.11
NUP50-203ENST00000407019 FAM58AQ8N1B3 248 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 TMEM178AQ8NBL3 297 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 TRBV6-6A0A0A6YYG2 114 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 DUXBA0A1W2PPF3 345 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 HSD17B6O14756 317 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 CD5P06127 495 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 ZNF806P0C7X5 589 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 CA6P23280 308 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
NUP50-203ENST00000407019 TBC1D28Q2M2D7 210 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 TMEM88Q6PEY1 159 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 LYPD6BQ8NI32 183 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 OR51I2Q9H344 312 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 ZNF175Q9Y473 711 aa14.37□□□□□ -0.11
NUP50-203ENST00000407019 TRAV24A0A0B4J272 114 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 J3QT63 122 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 HS3ST1O14792 307 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 F12P00748 615 aaPredicted RBP14.36□□□□□ -0.11
NUP50-203ENST00000407019 SFTA3P0C7M3 94 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 OR8U9P0C7N5 309 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 SPP1P10451 314 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 PVALBP20472 110 aaPredicted RBP14.36□□□□□ -0.11
NUP50-203ENST00000407019 EWSR1Q01844 656 aaKnown RBP eCLIP14.36□□□□□ -0.11
NUP50-203ENST00000407019 NHLH2Q02577 135 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 SPATA46Q5T0L3 261 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms