RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 Q8N402 240 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 MAFIPQ8WZ33 124 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 SNX22Q96L94 193 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF230Q9UIE0 474 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 SERPINE3A8MV23 424 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 H3BUI4 141 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 PTBP1P26599 531 aaKnown RBP eCLIP11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 RBM39Q14498 530 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 SLC36A1Q7Z2H8 476 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 MUC20Q8N307 709 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 FCAMRQ8WWV6 532 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 COQ2Q96H96 371 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 MED30Q96HR3 178 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
HERPUD1-203ENST00000379792 IGHV4-30-2A0A087WSY4 118 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 DVL1O14640 695 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 NDUFA2O43678 99 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 TPPPO94811 219 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 FSTL3O95633 263 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GLAP06280 429 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 RPS2P15880 293 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 NDUFB7P17568 137 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GLIPR1P48060 266 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 Q6ZPA2 131 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 C5orf24Q7Z6I8 188 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 LURAP1LQ8IV03 231 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GVQW1Q8N7I0 195 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GDPD1Q8N9F7 314 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 OR4K15Q8NH41 348 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 SETD6Q8TBK2 473 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GPX8Q8TED1 209 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 SMIM4Q8WVI0 70 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 THAP7Q9BT49 309 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 ST6GALNAC5Q9BVH7 336 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 KIF25Q9UIL4 384 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 GABARAPH6UMI1 98 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 CTDSPLO15194 276 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 NDUFB3O43676 98 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 MT-ND4P03905 459 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 LPLP06858 475 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 CSF3P09919 207 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 EDDM3BP56851 147 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 SEC61A1P61619 476 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 MRPS15P82914 257 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 ARL6IP1Q15041 203 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 CLEC12BQ2HXU8 276 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 TMEM155Q4W5P6 130 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 KRBOX4Q5JUW0 171 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 PIMREGQ9BSJ6 248 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 DCTN5Q9BTE1 182 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 ABCB10Q9NRK6 738 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 KAAG1Q9UBP8 84 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 SLC25A10Q9UBX3 287 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
HERPUD1-203ENST00000379792 LINC00854A0A1B0GVQ3 168 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 MGST3O14880 152 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 GSTZ1O43708 216 aaPredicted RBP11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 ORC5O43913 435 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 WNT2P09544 360 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 CD40LGP29965 261 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 GDPD3Q7L5L3 318 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 SPICQ8N5J4 248 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 PPP1R35Q8TAP8 253 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 MRPL30Q8TCC3 161 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 MBD6Q96DN6 1003 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 MIOXQ9UGB7 285 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.54
HERPUD1-203ENST00000379792 MEIKINA0A087WXM9 373 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 CA11O75493 328 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 NAPSAO96009 420 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 FCGR3AP08637 254 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 IL7P13232 177 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 RCC1P18754 421 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 SHEQ5VZ18 495 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 SPNS3Q6ZMD2 512 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 ZNF841Q6ZN19 808 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 OR5D13Q8NGL4 314 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 H1FXQ92522 213 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 NEIL1Q96FI4 390 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 FAM234AQ9H0X4 552 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 SCPEP1Q9HB40 452 aa11.7□□□□□ -0.54
HERPUD1-203ENST00000379792 PATZ1Q9HBE1 687 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms