RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 AANATQ16613 207 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 COMPP49747 757 aaPredicted RBP14.39□□□□□ -0.11
RGP1-201ENST00000378078 RANP62826 216 aaKnown RBP14.39□□□□□ -0.11
RGP1-201ENST00000378078 CDRT15L2A8MXV6 281 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 HIST1H1DP16402 221 aaKnown RBP14.39□□□□□ -0.11
RGP1-201ENST00000378078 SKP2Q13309 424 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 SLC25A53Q5H9E4 307 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 RNF24Q9Y225 148 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 MOB4Q9Y3A3 225 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 SCN2AQ99250 2005 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 C9orf170A2RU37 121 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 C1QBP02746 253 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 FPR2P25090 351 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 PNLIPRP3Q17RR3 467 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 NUFIP2Q7Z417 695 aaKnown RBP14.39□□□□□ -0.11
RGP1-201ENST00000378078 STXBP6Q8NFX7 210 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 ZNF665Q9H7R5 613 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 RASL12Q9NYN1 266 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 NTMQ9P121 344 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 HRKO00198 91 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 CCL13Q99616 98 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 NPAS1Q99742 590 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 KLK15Q9H2R5 256 aa14.39□□□□□ -0.11
RGP1-201ENST00000378078 LRRC37A3O60309 1634 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 IGHV5-10-1A0A0J9YXX1 117 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 GLULP15104 373 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 BTG1P62324 171 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 HCP5Q6MZN7 132 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 WDR74Q6RFH5 385 aaPredicted RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 Q6ZNB5 142 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 SS18L1O75177 396 aaPredicted RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 FAM157CP0CG43 387 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 CCL3P10147 92 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 CDKN2AP42771 156 aaKnown RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 CENPVQ7Z7K6 275 aaPredicted RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 PPP1R17O96001 155 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 MDH2P40926 338 aaKnown RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 CLDN20P56880 219 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 ISL1P61371 349 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 PSG6Q00889 435 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 OR4S2Q8NH73 311 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 FAM60AQ9NP50 221 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 KDM3BQ7LBC6 1761 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 TFAP2AP05549 437 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 RPS4Y1P22090 263 aaKnown RBP14.38□□□□□ -0.11
RGP1-201ENST00000378078 FAM74A4Q5TZK3 123 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 LDLRAD3Q86YD5 345 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 ASB10Q8WXI3 467 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 SLC6A13Q9NSD5 602 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 BET1LQ9NYM9 111 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 RNF7Q9UBF6 113 aa14.38□□□□□ -0.11
RGP1-201ENST00000378078 SUCLG1P53597 346 aaKnown RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 SNRNP40Q96DI7 357 aaKnown RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 ELOVL1Q9BW60 279 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 CELA2AP08217 269 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 ZG16BQ96DA0 208 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 TOLLIPQ9H0E2 274 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 OR51B2Q9Y5P1 312 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 LILRA5A6NI73 299 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 GPR6P46095 362 aaPredicted RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 EPHA8P29322 1005 aaPredicted RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 EVX1P49640 407 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 CBLN3Q6UW01 205 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 MDP1Q86V88 176 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 CADM4Q8NFZ8 388 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 MEGF10Q96KG7 1140 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 SYT11Q9BT88 431 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 CYSLTR2Q9NS75 346 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 FAM216AQ8WUB2 273 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 OIT3Q8WWZ8 545 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 PP6455Q8WZ26 134 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 GABARAPL3Q9BY60 117 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 SELENOKQ9Y6D0 94 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 IGHV3-35A0A0C4DH35 117 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 CYB5R3P00387 301 aaPredicted RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 ZBTB37Q5TC79 503 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 GBGT1Q8N5D6 347 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 LEAP2Q969E1 77 aa14.37□□□□□ -0.11
RGP1-201ENST00000378078 DNAJB12Q9NXW2 375 aaKnown RBP14.37□□□□□ -0.11
RGP1-201ENST00000378078 OTOFQ9HC10 1997 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 MFSD2BA6NFX1 497 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 KIR3DL2P43630 455 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 KCNJ3P48549 501 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 PMS2CLQ68D20 193 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 PSMB11A5LHX3 300 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 HOXC4P09017 264 aaPredicted RBP14.36□□□□□ -0.11
RGP1-201ENST00000378078 C21orf62-AS1Q17RA5 79 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 FAM53AQ6NSI3 398 aaPredicted RBP14.36□□□□□ -0.11
RGP1-201ENST00000378078 LIAT1Q6ZQX7 453 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 MRGPRFQ96AM1 343 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 MIA3Q5JRA6 1907 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 B3GNT9Q6UX72 402 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 GHITMQ9H3K2 345 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 GAPTQ8N292 157 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 OR13C6PQ8NH95 151 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 WNT16Q9UBV4 365 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 DAOP14920 347 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms