RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CASQ2O14958 399 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-202ENST00000340647 XPNPEP2O43895 674 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
BRCC3-202ENST00000340647 TMEM95Q3KNT9 176 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 OGFRL1Q5TC84 451 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-202ENST00000340647 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-202ENST00000340647 TTC23Q5W5X9 447 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 SATL1Q86VE3 508 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 LYPD6Q86Y78 171 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 DHRSXQ8N5I4 330 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 OR2T6Q8NHC8 308 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 GHSRQ92847 366 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 TMEM80Q96HE8 168 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 LINC00574Q9H8X3 128 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 KIF25Q9UIL4 384 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 ZNF281Q9Y2X9 895 aa13.66□□□□□ -0.22
BRCC3-202ENST00000340647 EXOSC1Q9Y3B2 195 aaKnown RBP13.66□□□□□ -0.22
BRCC3-202ENST00000340647 GPX5O75715 221 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 AMY1AP04745 511 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 AMY2AP04746 511 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 HTR1DP28221 377 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 C21orf33P30042 268 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-202ENST00000340647 PTGFRP43088 359 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 PAX5Q02548 391 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 SLC34A1Q06495 639 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 ST3GAL4Q11206 333 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 IL13RA2Q14627 380 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 OR52N1Q8NH53 320 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 FAM110DQ8TAY7 271 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-202ENST00000340647 STMN2Q93045 179 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 KIRREL1Q96J84 757 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 OCSTAMPQ9BR26 566 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 GAL3ST2Q9H3Q3 398 aa13.65□□□□□ -0.22
BRCC3-202ENST00000340647 TRBV5-7A0A0A0MS05 114 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-202ENST00000340647 NPIPB11E5RHQ5 1161 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 PIN1P1O15428 100 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 VSIG10L2P0DP72 767 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 CD28P10747 220 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 HLA-DRB5Q30154 266 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 TMPRSS11AQ6ZMR5 421 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 LYG1Q8N1E2 194 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 NCOR1P1Q9H4R4 102 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 TMEM138Q9NPI0 162 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 FKBP14Q9NWM8 211 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 IL36GQ9NZH8 169 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 PSORS1C1Q9UIG5 152 aa13.64□□□□□ -0.23
BRCC3-202ENST00000340647 BUB1B-PAK6H3BSN5 160 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 HTR3BO95264 441 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 CAPGP40121 348 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 DIAPH2-AS1Q14236 149 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
BRCC3-202ENST00000340647 NHLRC3Q5JS37 347 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 DDI2Q5TDH0 399 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 OR52W1Q6IF63 320 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 FAM53AQ6NSI3 398 aaPredicted RBP13.63□□□□□ -0.23
BRCC3-202ENST00000340647 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 GPER1Q99527 375 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 IFT22Q9H7X7 185 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 C8orf4Q9NR00 106 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 ABCB10Q9NRK6 738 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 NKX1-2Q9UD57 310 aaPredicted RBP13.63□□□□□ -0.23
BRCC3-202ENST00000340647 HSPE1-MOB4S4R3N1 261 aa13.63□□□□□ -0.23
BRCC3-202ENST00000340647 A0A1W2PPK0 400 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 FUOMA2VDF0 154 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 F2RL2O00254 374 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 GEMIN2O14893 280 aaKnown RBP13.62□□□□□ -0.23
BRCC3-202ENST00000340647 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 CSF1P09603 554 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 BDKRB2P30411 391 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 ZNF93P35789 620 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-202ENST00000340647 GP2P55259 537 aaKnown RBP13.62□□□□□ -0.23
BRCC3-202ENST00000340647 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
BRCC3-202ENST00000340647 C2orf68Q2NKX9 166 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 TPTE2P1Q5T6R2 138 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 Q6ZTK2 550 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 SUMF2Q8NBJ7 301 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 SETD9Q8NE22 299 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 FAM192AQ9GZU8 254 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 PLCXD1Q9NUJ7 323 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 OR6C3Q9NZP0 311 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 PITPNC1Q9UKF7 332 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 PCDHGB5Q9Y5G0 923 aa13.62□□□□□ -0.23
BRCC3-202ENST00000340647 NOTCH3Q9UM47 2321 aa13.61□□□□□ -0.23
BRCC3-202ENST00000340647 MEIKINA0A087WXM9 373 aa13.61□□□□□ -0.23
BRCC3-202ENST00000340647 IRGMA1A4Y4 181 aa13.61□□□□□ -0.23
BRCC3-202ENST00000340647 FAM90A18PA6NE21 464 aa13.61□□□□□ -0.23
BRCC3-202ENST00000340647 FAM90A16PA6NEW6 464 aa13.61□□□□□ -0.23
BRCC3-202ENST00000340647 FAM90A20PA6NIJ5 464 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms