RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TMEM106AQ96A25 262 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 AKR1E2Q96JD6 320 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 GPER1Q99527 375 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 IFT22Q9H7X7 185 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 LIN7BQ9HAP6 207 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 TMEM138Q9NPI0 162 aa14.23□□□□□ -0.13
HDDC3-201ENST00000330334 DIMT1Q9UNQ2 313 aaKnown RBP14.23□□□□□ -0.13
HDDC3-201ENST00000330334 BUB1B-PAK6H3BSN5 160 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 GABRPO00591 440 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 TOR1AO14656 332 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 C21orf33P30042 268 aaPredicted RBP14.22□□□□□ -0.13
HDDC3-201ENST00000330334 GDNFP39905 211 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 SOX2P48431 317 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 ATXN7L3Q14CW9 347 aaPredicted RBP14.22□□□□□ -0.13
HDDC3-201ENST00000330334 RSU1Q15404 277 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 HLA-DRB5Q30154 266 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 NHLRC3Q5JS37 347 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 XAF1Q6GPH4 301 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 CCDC144NLQ6NUI1 221 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 SMIM19Q96E16 107 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 OCSTAMPQ9BR26 566 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 PPIL3Q9H2H8 161 aaKnown RBP14.22□□□□□ -0.13
HDDC3-201ENST00000330334 ZNF286AQ9HBT8 521 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 TAS2R4Q9NYW5 299 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 IL36GQ9NZH8 169 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 ZNF281Q9Y2X9 895 aa14.22□□□□□ -0.13
HDDC3-201ENST00000330334 EXOSC1Q9Y3B2 195 aaKnown RBP14.22□□□□□ -0.13
HDDC3-201ENST00000330334 PEX14O75381 377 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 GPX5O75715 221 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 MYL12AP19105 171 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 PAN3Q58A45 887 aaKnown RBP14.21□□□□□ -0.13
HDDC3-201ENST00000330334 OR2G6Q5TZ20 316 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 Q6ZS46 218 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 SLC16A12Q6ZSM3 486 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 SETD9Q8NE22 299 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 OR10A7Q8NGE5 316 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 OR52N1Q8NH53 320 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 OR9G1Q8NH87 305 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 KIRREL1Q96J84 757 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 NR1H4Q96RI1 486 aaPredicted RBP14.21□□□□□ -0.13
HDDC3-201ENST00000330334 PCDHB16Q9NRJ7 776 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 PAK1IP1Q9NWT1 392 aaPredicted RBP14.21□□□□□ -0.13
HDDC3-201ENST00000330334 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.21□□□□□ -0.13
HDDC3-201ENST00000330334 SIRT4Q9Y6E7 314 aaPredicted RBP14.21□□□□□ -0.13
HDDC3-201ENST00000330334 HSPE1-MOB4S4R3N1 261 aa14.21□□□□□ -0.13
HDDC3-201ENST00000330334 MEIKINA0A087WXM9 373 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 CD28P10747 220 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 VDAC2P45880 294 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 PPP3R1P63098 170 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 ADARB1P78563 741 aaKnown RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 MED21Q13503 144 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 KPRPQ5T749 579 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 DMKNQ6E0U4 476 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 LINC00596Q86U02 117 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 TMEM80Q96HE8 168 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 RBM14Q96PK6 669 aaKnown RBP14.2□□□□□ -0.14
HDDC3-201ENST00000330334 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 MMP28Q9H239 520 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 KIF25Q9UIL4 384 aa14.2□□□□□ -0.14
HDDC3-201ENST00000330334 TRBV5-5A0A0J9YX44 114 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 ZNF780AO75290 641 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-201ENST00000330334 OR2F2O95006 317 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 CLIC3O95833 236 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 IL1AP01583 271 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 BDKRB2P30411 391 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 ZNF93P35789 620 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-201ENST00000330334 MNDAP41218 407 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 PIGYQ3MUY2 71 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 THNSL2Q86YJ6 484 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 ZNF485Q8NCK3 441 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 OR4F17Q8NGA8 305 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 OR13A1Q8NGR1 328 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 GHSRQ92847 366 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 OR4F4Q96R69 305 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
HDDC3-201ENST00000330334 ING3Q9NXR8 418 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 CALYQ9NYX4 217 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 CLEC2DQ9UHP7 191 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 AMMECR1Q9Y4X0 333 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-201ENST00000330334 NOTCH3Q9UM47 2321 aa14.19□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A18PA6NE21 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A16PA6NEW6 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A20PA6NIJ5 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A9PA6NNJ1 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 ADARB2-AS1A8MUL3 147 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A12PA8MX19 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A5PA8MXJ8 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 M0QZK8 103 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 HSPB6O14558 160 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 XPNPEP2O43895 674 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 HTR3BO95264 441 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A15PP0C7V4 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A13PP0C7W8 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A14PP0C7W9 464 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM90A24PP0C7X0 464 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms