RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ACTR3CQ9C0K3 210 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 OR5H1A6NKK0 313 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 SIRPB1O00241 398 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RAMP1O60894 148 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RAC3P60763 192 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RND3P61587 244 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 PRDX4Q13162 271 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RAB31Q13636 194 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 FAM27BQ5VT28 67 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF574Q6ZN55 896 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RTN4RL2Q86UN3 420 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 GINS3Q9BRX5 216 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ABCA7Q8IZY2 2146 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 RRP8O43159 456 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 IGHEP01854 428 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TRGC2P03986 189 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CLPSP04118 112 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CST2P09228 141 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ENDOGQ14249 297 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 WIPI1Q5MNZ9 446 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TUBA4BQ9H853 241 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 PHF3Q92576 2039 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CD63P08962 238 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TLE1Q04724 770 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 EIF3IQ13347 325 aaKnown RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ANGPTL4Q9BY76 406 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM222Q9H0R3 208 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 DUSP15Q9H1R2 295 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 OBP2BQ9NPH6 170 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF319Q9P2F9 582 aa11.09□□□□□ -0.63
DNMT3A-202ENST00000321117 MT-CO2P00403 227 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 COX5AP20674 150 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 RBM11P57052 281 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 SNAI3Q3KNW1 292 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 APOBEC3DQ96AK3 386 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 TM2D1Q9BX74 207 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 TERTO14746 1132 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 MBP02144 154 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 CCL3P10147 92 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 FOXO1Q12778 655 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 GALNT14Q96FL9 552 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 GPR27Q9NS67 375 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 TP53TG5Q9Y2B4 290 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 IGHV3-64DA0A0J9YX35 117 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 SYNGR2O43760 224 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 EDN3P14138 238 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 HTD2P86397 168 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF705AQ6ZN79 300 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 PLEKHA3Q9HB20 300 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 DMRT1Q9Y5R6 373 aa11.08□□□□□ -0.64
DNMT3A-202ENST00000321117 UBE2CO00762 179 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 TOX3O15405 576 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF737O75373 536 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 TGFBR3Q03167 851 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 CLN3Q13286 438 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 LTC4SQ16873 150 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 RHBDD1Q8TEB9 315 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 SF3B5Q9BWJ5 86 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 PCNTO95613 3336 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 DNAH12Q6ZR08 3092 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 QRFPP83859 136 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 RNF144BQ7Z419 303 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 WBP1Q96G27 269 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 PHF7Q9BWX1 381 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 TMEM38BQ9NVV0 291 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 XKRY2A2RUG3 117 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 C5orf52A6NGY3 159 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 FOLR2P14207 255 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 GALR1P47211 349 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 BMPERQ8N8U9 685 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 OR10A7Q8NGE5 316 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 OR10D3Q8NH80 312 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms