RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 M0R082 166 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FBXO24O75426 580 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 AMMECR1LQ6DCA0 310 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 Q6ZN92 141 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 VASH2Q86V25 355 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 BVESQ8NE79 360 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 LINC00470Q9BZP3 86 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 NPDC1Q9NQX5 325 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 TUBD1Q9UJT1 453 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DHHO43323 396 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DXOO77932 396 aaKnown RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 HPXP02790 462 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CSRP3P50461 194 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PSG9Q00887 426 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 B4GALNT1Q00973 533 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 LIAT1Q6ZQX7 453 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FAM169BQ8N8A8 192 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CDC14BO60729 498 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SIM1P81133 766 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZNF117Q03924 483 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ALKAL2Q6UX46 152 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TMEM183AQ8IXX5 376 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZNF645Q8N7E2 425 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 OR10AG1Q8NH19 301 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PUS1Q9Y606 427 aaKnown RBP eCLIP3.55□□□□□ -1.84
USH2A-201ENST00000307340 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CRYM-AS1A6NIL9 109 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZFP92A6NM28 416 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SSSCA1O60232 199 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 F13BP05160 661 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TAL1P17542 331 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 RNF4P78317 190 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 LILRA6Q6PI73 481 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 P4HTMQ9NXG6 502 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PSENENQ9NZ42 101 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 WNK2Q9Y3S1 2297 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 HS3ST1O14792 307 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FCARP24071 287 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 COL5A1-AS1Q5SY13 56 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 C19orf48Q6RUI8 117 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TSACCQ96A04 125 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 TMLHEQ9NVH6 421 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PPP1R3CQ9UQK1 317 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 NTNG1Q9Y2I2 539 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 YBX2Q9Y2T7 364 aaKnown RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 APC2O95996 2303 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 RBFOX3A6NFN3 312 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 COX7A2P2O60397 106 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FXYD4P59646 89 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FGF12P61328 243 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FMODQ06828 376 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 UBE2V2Q15819 145 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 HIST3H3Q16695 136 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CHST14Q8NCH0 376 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 GPM6AP51674 278 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZNF121P58317 390 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 SLC26A1Q9H2B4 701 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 GDF2Q9UK05 429 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 NDUFS8O00217 210 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SFT2D2O95562 160 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 RELQ04864 619 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 C1orf185Q5T7R7 199 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TMEM215Q68D42 235 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 GCSAMQ8N6F7 178 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 C5orf17Q8NAS9 161 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DMRT1Q9Y5R6 373 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CEACAM21Q3KPI0 293 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 LCN10Q6JVE6 187 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DEFB132Q7Z7B7 95 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 HHIPQ96QV1 700 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 MS4A7Q9GZW8 240 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZFP30Q9Y2G7 519 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZNF738Q8NE65 137 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 OR52E5Q8NH55 327 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SP7Q8TDD2 431 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 RAB1CQ92928 201 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 IKZF5Q9H5V7 419 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 HEXA-AS1Q9H8Q6 139 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 LRP12Q9Y561 859 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TRAV1-1A0A0B4J248 108 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PIAS2O75928 621 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 FGF5P12034 268 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 RPL7P18124 248 aaKnown RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 MUC15Q8N387 334 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 BEX2Q9BXY8 128 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TMEM222Q9H0R3 208 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 C2orf16Q68DN1 1984 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 KIAA1549Q9HCM3 1950 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DBX1A6NMT0 343 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 F2RP25116 425 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 GJA5P36382 358 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CDC34P49427 236 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 PRR27Q6MZM9 219 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CXXC4Q9H2H0 198 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SMPXQ9UHP9 88 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 PLPP3O14495 311 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 INSM2Q96T92 566 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 RNF5Q99942 180 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms