RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ESPL1Q14674 2120 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 A0A087WWC5 75 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 NPIPA2E9PIF3 369 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 NPIPA3F8WFD2 350 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 HBE1P02100 147 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 SMIM7Q9BQ49 75 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 FGF21Q9NSA1 209 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 TRANK1O15050 2925 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 METTL15P1P0C7V9 234 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 SPCS3P61009 180 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 PLCXD3Q63HM9 321 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 OR10A7Q8NGE5 316 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 ULBP2Q9BZM5 246 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 PITPNC1Q9UKF7 332 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 FOSL2P15408 326 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 PLPPR5Q32ZL2 321 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 C1orf53Q5VUE5 145 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 OIT3Q8WWZ8 545 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 C2orf16Q68DN1 1984 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
COL6A2-201ENST00000300527 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 H3F3AP84243 136 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
COL6A2-201ENST00000300527 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 OR6X1Q8NH79 312 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 SPTSSAQ969W0 71 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 RBMXL1Q96E39 390 aaKnown RBP12.68□□□□□ -0.38
COL6A2-201ENST00000300527 CCL28Q9NRJ3 127 aa12.68□□□□□ -0.38
COL6A2-201ENST00000300527 LYRM2Q9NU23 88 aaPredicted RBP12.68□□□□□ -0.38
COL6A2-201ENST00000300527 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF25P17030 456 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 CCL1P22362 96 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 SLC25A26Q70HW3 274 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 C16orf82Q7Z2V1 217 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 OR1K1Q8NGR3 316 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 MOB3AQ96BX8 217 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ELOVL1Q9BW60 279 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 FUT9Q9Y231 359 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 BCAT2O15382 392 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 OR4A8P0C604 315 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 OR1P1Q8NH06 330 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 SSC4DQ8WTU2 575 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 PCGF1Q9BSM1 259 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF705FA8MVS1 300 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 CYB5R3P00387 301 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 NRASP01111 189 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 SCTP09683 121 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF705DP0CH99 300 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF705BP0CI00 300 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 PRSS8Q16651 343 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 FAM90A2PQ658T7 463 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 TCEAL6Q6IPX3 200 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF818PQ6ZRF7 136 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 OR5B12Q96R08 314 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 TMEM222Q9H0R3 208 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 SMDT1Q9H4I9 107 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 DKKL1Q9UK85 242 aa12.67□□□□□ -0.38
COL6A2-201ENST00000300527 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
COL6A2-201ENST00000300527 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 A0A1B0GX78 115 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 BCL2P10415 239 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 RPL29P47914 159 aaKnown RBP12.66□□□□□ -0.38
COL6A2-201ENST00000300527 NPBWR2P48146 333 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 SHBQ15464 509 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 SELENOHQ8IZQ5 122 aaKnown RBP12.66□□□□□ -0.38
COL6A2-201ENST00000300527 D2HGDHQ8N465 521 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF441Q8N8Z8 693 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 A8MWP6 167 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 DFFBO76075 338 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 TK1P04183 234 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 ENDOGQ14249 297 aaKnown RBP12.66□□□□□ -0.38
COL6A2-201ENST00000300527 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
COL6A2-201ENST00000300527 SLC16A14Q7RTX9 510 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 OR13D1Q8NGV5 346 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 MRGPRX4Q96LA9 322 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 ATP5SQ99766 215 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 THADAQ6YHU6 1953 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
COL6A2-201ENST00000300527 A0A0U1RQK1 487 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms