RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 IL13RA2Q14627 380 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 DBX2Q6ZNG2 339 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 MCEMP1Q8IX19 187 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 OR10S1Q8NGN2 331 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 ZNF799Q96GE5 643 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 CACNA1EQ15878 2313 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 CCL5P13501 91 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 HLA-BQ31612 363 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 TBC1D26Q86UD7 250 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 CAPNS2Q96L46 248 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 PRSS50Q9UI38 385 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 V9GYS6 101 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 MAP1LC3B2A6NCE7 125 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 A8MWP6 167 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 DXOO77932 396 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 EFNA3P52797 238 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 UCP3P55916 312 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 PRSS8Q16651 343 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 RDH5Q92781 318 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 MAP1LC3BQ9GZQ8 125 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 ADAM19Q9H013 955 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 PLXNA2O75051 1894 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 HS3ST1O14792 307 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 TNFSF14O43557 240 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 ISG15P05161 165 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 SLC25A26Q70HW3 274 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 SLC16A14Q7RTX9 510 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 C9orf40Q8IXQ3 194 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 HLA-CQ95604 372 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 BOD1Q96IK1 185 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 RBKSQ9H477 322 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 PPP1R3CQ9UQK1 317 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 C3orf80F5H4A9 247 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 PLRG1O43660 514 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 ZNF737O75373 536 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 EFEMP2O95967 443 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 TMEM187Q14656 261 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 TMEM183AQ8IXX5 376 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 FLVCR1-AS1Q8TAF5 88 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 LIME1Q9H400 295 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 ABCA7Q8IZY2 2146 aa13.86□□□□□ -0.19
PRPF40B-201ENST00000261897 SEMA4FO95754 770 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 OPN1MWP04001 364 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 OPN1MW2P0DN77 364 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 OPN1MW3P0DN78 364 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 GAPTQ8N292 157 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 ZNF296Q8WUU4 475 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 FGF14Q92915 247 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 ATP5SQ99766 215 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 ERRFI1Q9UJM3 462 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 NCOA6Q14686 2063 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 SIAH2O43255 324 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 OR3A1P47881 315 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 JOSD1Q15040 202 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 GLRX2Q9NS18 164 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 SLC7A10Q9NS82 523 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 TMED3Q9Y3Q3 217 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 TRAPPC1Q9Y5R8 145 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 WDR1O75083 606 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 RPLP1P05386 114 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 CEACAM1P13688 526 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 QRFPP83859 136 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 KLHDC7BQ96G42 594 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 TP53TG5Q9Y2B4 290 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 DOCK10Q96BY6 2186 aa13.85□□□□□ -0.19
PRPF40B-201ENST00000261897 TRBV11-1A0A0K0K1C0 115 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 LOC390937A0A1W2PQ73 354 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 NOL4LQ96MY1 436 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 C2orf88Q9BSF0 95 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 ULBP2Q9BZM5 246 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 CCL28Q9NRJ3 127 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 ANKUB1A6NFN9 424 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 FRG2CA6NGY1 282 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 LRRC3CA6NJW4 275 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 ALG1L2C9J202 215 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 CYB5R3P00387 301 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 ST6GALNAC3Q8NDV1 305 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 VPS13AQ96RL7 3174 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 FER1L5A0AVI2 2057 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 MPPED1O15442 326 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 FGF5P12034 268 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 NTF3P20783 257 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 HIST1H3AP68431 136 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 ARSJQ5FYB0 599 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 DEGS2Q6QHC5 323 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 TMPRSS7Q7RTY8 843 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 C1QL4Q86Z23 238 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 C11orf42Q8N5U0 333 aa13.84□□□□□ -0.19
PRPF40B-201ENST00000261897 PPYP01298 95 aa13.83□□□□□ -0.19
PRPF40B-201ENST00000261897 BCL2P10415 239 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms