RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Acsf3Q3URE1 583 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fam71f1Q3UZD7 341 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Plpp1Q61469 283 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fam122bQ6NZE7 255 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mindy2Q6PDI6 601 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tas2r113Q7M711 309 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 TMEM229BQ8BFQ2 167 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Prss35Q8C0F9 409 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Lmf2Q8C3X8 702 aaKnown RBP5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r189Q8K3N3 312 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Crtac1Q8R555 646 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Arl6ip5Q8R5J9 188 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr341Q8VGK9 313 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1038Q8VGS1 319 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cdca4Q9CWM2 237 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Pdzd11Q9CZG9 140 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Asb5Q9D1A4 329 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Sdf2Q9DCT5 211 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Plekha3Q9ERS4 297 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Clec6aQ9JKF4 209 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Crim1Q9JLL0 1037 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 B4galt2Q9Z2Y2 369 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 A26c2A0A140LHE4 291 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Igkv6-25A0A140T8N7 115 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 A0A286YCH8 300 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 3110040M04RikA0A286YDK0 300 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 A0A286YE43 300 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Kiaa1324A2AFS3 1009 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ajap1A2ALI5 412 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 ItpkbB2RXC2 942 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm3727J3QM54 205 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Zfp955bL7N232 545 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 P01808 119 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 P06321 130 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 SbpP15501 199 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ca6P18761 317 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tnfsf8P32972 239 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ly6fP35460 134 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Hist1h2baP70696 127 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Hormad2Q5SQP1 306 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Sox19Q62249 55 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Trim69Q80X56 500 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tmem255aQ8BHW5 351 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gpr137bQ8BNQ3 385 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cxcl16Q8BSU2 246 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Nhlrc2Q8BZW8 725 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 PigmQ8C2R7 423 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r21Q8R2C6 297 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mitd1Q8VDV8 249 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Taar1Q923Y8 332 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Glipr2Q9CYL5 154 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ceacam13Q9DAT7 263 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tmem25Q9DCF1 365 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 GltpQ9JL62 209 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Klrc3Q9QXN7 221 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Spry4Q9WTP2 300 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Pus1Q9WU56 423 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Wif1Q9WUA1 379 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mixl1Q9WUI0 231 aa5.56□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm12789B1AUV7 164 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 AsmtD3KU66 387 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Dcpp2E9PYC2 171 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn2r113E9PZA6 856 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Zfp961E9Q4R5 444 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Dcpp1L7N1X9 171 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn2r51L7N215 852 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 BatfO35284 125 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rab33bO35963 229 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Aqp7O54794 303 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 B3galt1O54904 326 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mtco2P00405 227 aaKnown RBP5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 P01638 115 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 HckP08103 524 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 AvpP35455 168 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 FauP35545 74 aaKnown RBP5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ccr2P51683 373 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 CdaP56389 146 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gabra1P62812 455 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Col10a1Q05306 680 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Klhdc2Q4G5Y1 406 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Nxph1Q61200 271 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Slc35e3Q6PGC7 313 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1133Q7TR44 313 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr517Q7TRU4 314 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 NelfaQ8BG30 530 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fbxw26Q8BI58 466 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cdhr3Q8BL00 831 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gtf2f2Q8R0A0 249 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr800Q8VFH7 311 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr350Q8VFP8 312 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Sectm1aQ921W8 192 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr114Q923Q8 312 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Arrdc1Q99KN1 434 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Q9CWB7 115 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 MmachcQ9CZD0 279 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Kti12Q9D1R2 351 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r53Q9EP93 310 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 PerpQ9JK95 193 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 PtprbB2RU80 1998 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1055A2AVX9 346 aa5.55□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms