RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 BRF1Q92994 677 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
CASC19-230ENST00000641421 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
CASC19-230ENST00000641421 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
CASC19-230ENST00000641421 PFKFB2O60825 505 aa12.61□□□□□ -0.39
CASC19-230ENST00000641421 DTNBO60941 627 aa12.61□□□□□ -0.39
CASC19-230ENST00000641421 BCAMP50895 628 aa12.61□□□□□ -0.39
CASC19-230ENST00000641421 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
CASC19-230ENST00000641421 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
CASC19-230ENST00000641421 LY75O60449 1722 aa12.61□□□□□ -0.39
CASC19-230ENST00000641421 TCRBV5S4A2TA0A5A2 114 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■□□ 17
CASC19-230ENST00000641421 HAND2P61296 217 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 USP48Q86UV5 1035 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
CASC19-230ENST00000641421 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
CASC19-230ENST00000641421 COL4A1P02462 1669 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 ZNF213O14771 459 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 RFC4P35249 363 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 ZSCAN23Q3MJ62 389 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 GAS2L3Q86XJ1 694 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 LLPHQ9BRT6 129 aaKnown RBP12.59□□□□□ -0.39
CASC19-230ENST00000641421 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
CASC19-230ENST00000641421 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 SBF2Q86WG5 1849 aa12.59□□□□□ -0.39
CASC19-230ENST00000641421 APPP05067 770 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 ZNF445P59923 1031 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 CSPP1Q1MSJ5 1256 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 FBXL16Q8N461 479 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 NCOA7Q8NI08 942 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 STRBPQ96SI9 672 aaKnown RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
CASC19-230ENST00000641421 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
CASC19-230ENST00000641421 PHF14O94880 888 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 MCM5P33992 734 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 RPS8P62241 208 aaKnown RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 SCRN1Q12765 414 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 ALX1Q15699 326 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 FAM196AQ6ZSG2 479 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 MB21D2Q8IYB1 491 aaPredicted RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 DOCK2Q92608 1830 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 PRC1O43663 620 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 JAK2O60674 1132 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 MBD4O95243 580 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 CAVIN4Q5BKX8 364 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 TMEM63CQ9P1W3 806 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
CASC19-230ENST00000641421 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
CASC19-230ENST00000641421 MYO5AQ9Y4I1 1855 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 NPHP1O15259 732 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 ADRA2BP18089 450 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 GYG1P46976 350 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 DNM1Q05193 864 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 TRDNQ13061 729 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
CASC19-230ENST00000641421 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
CASC19-230ENST00000641421 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms