RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 R3HCC1Q9Y3T6 440 aaKnown RBP9.53□□□□□ -0.88
SCARB2-224ENST00000640880 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-224ENST00000640880 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-224ENST00000640880 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 SOX18P35713 384 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 CRKP46108 304 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 PLAURQ03405 335 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 SPRED3Q2MJR0 410 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 SRRTQ9BXP5 876 aaKnown RBP9.52□□□□□ -0.89
SCARB2-224ENST00000640880 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 PRKAG3Q9UGI9 489 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
SCARB2-224ENST00000640880 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 ENC1O14682 589 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 TFE3P19532 575 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-224ENST00000640880 ITPKAP23677 461 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 LBRQ14739 615 aaKnown RBP9.51□□□□□ -0.89
SCARB2-224ENST00000640880 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 CCDC81Q6ZN84 652 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 NSUN5Q96P11 429 aaKnown RBP9.51□□□□□ -0.89
SCARB2-224ENST00000640880 NECAB3Q96P71 396 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-224ENST00000640880 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 SNTG2Q9NY99 539 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 WDR97A6NE52 1622 aa9.51□□□□□ -0.89
SCARB2-224ENST00000640880 RIPOR1Q6ZS17 1223 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 FAM196AQ6ZSG2 479 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 CEP120Q8N960 986 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 DEPDC7Q96QD5 511 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 HHIPQ96QV1 700 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
SCARB2-224ENST00000640880 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
SCARB2-224ENST00000640880 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SOGA1O94964 1423 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 CCDC85CA6NKD9 419 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 TLR3O15455 904 aaKnown RBP9.49□□□□□ -0.89
SCARB2-224ENST00000640880 PAGE1O75459 146 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 TNP2Q05952 138 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SPEM2Q0P670 501 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 RASA3Q14644 834 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 PTPROQ16827 1216 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SEZ6Q53EL9 994 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SLITRK4Q8IW52 837 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 BHMTQ93088 406 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SHDQ96IW2 340 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 RNPC3Q96LT9 517 aaKnown RBP9.49□□□□□ -0.89
SCARB2-224ENST00000640880 BHLHE41Q9C0J9 482 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-224ENST00000640880 GPN3Q9UHW5 284 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-224ENST00000640880 PPT2Q9UMR5 302 aa9.49□□□□□ -0.89
SCARB2-224ENST00000640880 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 A0A096LPE4 126 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 A0A1W2PPZ6 126 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 ENPP3O14638 875 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 SMAD7O15105 426 aaKnown RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 MAP3K6O95382 1288 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 THBS1P07996 1170 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 RPS26P62854 115 aaKnown RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 RAB44Q7Z6P3 723 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-224ENST00000640880 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 ZNF576Q9H609 170 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 MARK1Q9P0L2 795 aa9.48□□□□□ -0.89
SCARB2-224ENST00000640880 FAM221BA6H8Z2 402 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 LMNB1P20700 586 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 FAAP100Q0VG06 881 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.89
SCARB2-224ENST00000640880 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-224ENST00000640880 TRIM42Q8IWZ5 723 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-224ENST00000640880 FBXO27Q8NI29 283 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 NXPE3Q969Y0 559 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 SLC30A3Q99726 388 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
SCARB2-224ENST00000640880 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
SCARB2-224ENST00000640880 PBRM1Q86U86 1689 aa9.46□□□□□ -0.89
SCARB2-224ENST00000640880 hCG_2014768A0A024R1R8 64 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 NFKBIEO00221 500 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 F13A1P00488 732 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 TNNI3KQ59H18 835 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 RPS26P11Q5JNZ5 115 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-224ENST00000640880 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-224ENST00000640880 KCNB2Q92953 911 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 EFCC1Q9HA90 598 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 ROBO2Q9HCK4 1378 aa9.46□□□□□ -0.9
SCARB2-224ENST00000640880 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-224ENST00000640880 MCM4P33991 863 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 NRLP54845 237 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
SCARB2-224ENST00000640880 UBAP2LQ14157 1087 aaKnown RBP9.45□□□□□ -0.9
SCARB2-224ENST00000640880 LRP10Q7Z4F1 713 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 FAM169BQ8N8A8 192 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 JARID2Q92833 1246 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-224ENST00000640880 LRRC3Q9BY71 257 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms