RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CEP135Q66GS9 1140 aa9.87□□□□□ -0.83
RFC1-217ENST00000639695 ACAD11Q709F0 780 aa9.87□□□□□ -0.83
RFC1-217ENST00000639695 RASSF4Q9H2L5 321 aa9.87□□□□□ -0.83
RFC1-217ENST00000639695 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
RFC1-217ENST00000639695 STOML1Q9UBI4 398 aa9.87□□□□□ -0.83
RFC1-217ENST00000639695 OAS3Q9Y6K5 1087 aaKnown RBP9.87□□□□□ -0.83
RFC1-217ENST00000639695 DDX3YO15523 660 aaKnown RBP9.86□□□□□ -0.83
RFC1-217ENST00000639695 LDHBP07195 334 aaKnown RBP9.86□□□□□ -0.83
RFC1-217ENST00000639695 CD68P34810 354 aaPredicted RBP9.86□□□□□ -0.83
RFC1-217ENST00000639695 MAPK8P45983 427 aa9.86□□□□□ -0.83
RFC1-217ENST00000639695 ATP2B2Q01814 1243 aa9.86□□□□□ -0.83
RFC1-217ENST00000639695 FMR1Q06787 632 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFC1-217ENST00000639695 KIAA1211Q6ZU35 1233 aa9.86□□□□□ -0.83
RFC1-217ENST00000639695 ZDHHC13Q8IUH4 622 aa9.86□□□□□ -0.83
RFC1-217ENST00000639695 ZBTB39O15060 712 aa9.85□□□□□ -0.83
RFC1-217ENST00000639695 ADAM11O75078 769 aa9.85□□□□□ -0.83
RFC1-217ENST00000639695 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
RFC1-217ENST00000639695 ERCC5P28715 1186 aaPredicted RBP9.85□□□□□ -0.83
RFC1-217ENST00000639695 MUC3BQ9H195 1237 aa9.85□□□□□ -0.83
RFC1-217ENST00000639695 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.85□□□□□ -0.83
RFC1-217ENST00000639695 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
RFC1-217ENST00000639695 EPHA1P21709 976 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 CDC27P30260 824 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 HYAL2Q12891 473 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 MRPL58Q14197 206 aaKnown RBP9.84□□□□□ -0.83
RFC1-217ENST00000639695 TRIM42Q8IWZ5 723 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 UBASH3BQ8TF42 649 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 FAM46AQ96IP4 442 aaKnown RBP9.84□□□□□ -0.83
RFC1-217ENST00000639695 C7orf69Q9H7B7 122 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
RFC1-217ENST00000639695 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
RFC1-217ENST00000639695 FSCN2O14926 492 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 DHX15O43143 795 aaKnown RBP9.83□□□□□ -0.84
RFC1-217ENST00000639695 FZD6O60353 706 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 ZAP70P43403 619 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 EHHADHQ08426 723 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 DSC3Q14574 896 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 SF3A1Q15459 793 aaKnown RBP9.83□□□□□ -0.84
RFC1-217ENST00000639695 CACTIN-AS1Q8N1I8 211 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 GPR152Q8TDT2 470 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 DCAF11Q8TEB1 546 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 PIK3R5Q8WYR1 880 aa9.83□□□□□ -0.84
RFC1-217ENST00000639695 HMX2A2RU54 273 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 COBLO75128 1261 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 KIF4AO95239 1232 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 USP5P45974 858 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 NAALADL2Q58DX5 795 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 PARP2Q9UGN5 583 aa9.82□□□□□ -0.84
RFC1-217ENST00000639695 KRTAP4-8A0A0G2JLE6 195 aa9.81□□□□□ -0.84
RFC1-217ENST00000639695 SORBS3O60504 671 aa9.81□□□□□ -0.84
RFC1-217ENST00000639695 SMNDC1O75940 238 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFC1-217ENST00000639695 GP2P55259 537 aaKnown RBP9.81□□□□□ -0.84
RFC1-217ENST00000639695 NFIAQ12857 509 aa9.81□□□□□ -0.84
RFC1-217ENST00000639695 UTP4Q969X6 686 aaKnown RBP9.81□□□□□ -0.84
RFC1-217ENST00000639695 DUSP9Q99956 384 aaKnown RBP9.81□□□□□ -0.84
RFC1-217ENST00000639695 PRR19A6NJB7 356 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 BTBD11A6QL63 1104 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 GSC2O15499 205 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 SPINK2P20155 84 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 PSMD2Q13200 908 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 CEP120Q8N960 986 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 TMEM87AQ8NBN3 555 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 ALKBH8Q96BT7 664 aaKnown RBP9.8□□□□□ -0.84
RFC1-217ENST00000639695 KLHDC7BQ96G42 594 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 FAM129BQ96TA1 746 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 POP1Q99575 1024 aaKnown RBP9.8□□□□□ -0.84
RFC1-217ENST00000639695 PBX4Q9BYU1 374 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 CEP41Q9BYV8 373 aa9.8□□□□□ -0.84
RFC1-217ENST00000639695 ACPPP15309 386 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 PCSK2P16519 638 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 IRAK1P51617 712 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 DUOXA2Q1HG44 320 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 TTC39BQ5VTQ0 682 aaPredicted RBP9.79□□□□□ -0.84
RFC1-217ENST00000639695 ALG1LQ6GMV1 187 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 TMC4Q7Z404 712 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 SPACA7Q96KW9 195 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 MYRFLQ96LU7 910 aa9.79□□□□□ -0.84
RFC1-217ENST00000639695 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
RFC1-217ENST00000639695 TAL1P17542 331 aaPredicted RBP9.78□□□□□ -0.84
RFC1-217ENST00000639695 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
RFC1-217ENST00000639695 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
RFC1-217ENST00000639695 FMNL2Q96PY5 1086 aa9.78□□□□□ -0.84
RFC1-217ENST00000639695 ABI2Q9NYB9 513 aaPredicted RBP9.78□□□□□ -0.84
RFC1-217ENST00000639695 TMEM63CQ9P1W3 806 aa9.78□□□□□ -0.84
RFC1-217ENST00000639695 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
RFC1-217ENST00000639695 VTI1BQ9UEU0 232 aa9.78□□□□□ -0.84
RFC1-217ENST00000639695 PAX4O43316 350 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
RFC1-217ENST00000639695 DAB2P98082 770 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 UVSSAQ2YD98 709 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 RNF43Q68DV7 783 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 UBXN4Q92575 508 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 NIF3L1Q9GZT8 377 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
RFC1-217ENST00000639695 PREPP48147 710 aa9.76□□□□□ -0.85
RFC1-217ENST00000639695 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
RFC1-217ENST00000639695 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
RFC1-217ENST00000639695 KLHL23Q8NBE8 558 aa9.76□□□□□ -0.85
RFC1-217ENST00000639695 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
RFC1-217ENST00000639695 GPR182O15218 404 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms