RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 HSPA4P34932 840 aa17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 RRAGBQ5VZM2 374 aa17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 SEC62Q99442 399 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 SAMM50Q9Y512 469 aa17.04■□□□□ 0.32
KCNMA1-262ENST00000639489 NEMFO60524 1076 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 YEATS4O95619 227 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 MYL10Q9BUA6 226 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 STAT6P42226 847 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 TAF4BQ92750 862 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.325e-14■■■■■ 211.5
KCNMA1-262ENST00000639489 LIG1P18858 919 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 LUZP1Q86V48 1076 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
KCNMA1-262ENST00000639489 SKILP12757 684 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 SSR1P43307 286 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 JAK2O60674 1132 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 ANKRD2Q9GZV1 360 aa17.02■□□□□ 0.32
KCNMA1-262ENST00000639489 A0A0D9SFI3 127 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 FGFR1OPO95684 399 aaKnown RBP17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 CCDC102AQ96A19 550 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 BMP15O95972 392 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 STX17P56962 302 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 PTH1RQ03431 593 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 LPIN2Q92539 896 aa17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 ANGEL1Q9UNK9 670 aaKnown RBP17.02■□□□□ 0.31
KCNMA1-262ENST00000639489 USP6P35125 1406 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 ATP5JP18859 108 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 KIF20AO95235 890 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 TMCO3Q6UWJ1 677 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
KCNMA1-262ENST00000639489 MCM7P33993 719 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 TNNI2P48788 182 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17■□□□□ 0.31
KCNMA1-262ENST00000639489 CASQ1P31415 396 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
KCNMA1-262ENST00000639489 GNG11P61952 73 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 PLIN2Q99541 437 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 VEZTQ9HBM0 779 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 ASAP1Q9ULH1 1129 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 UFL1O94874 794 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 ERLIN2O94905 339 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 LRRC24Q50LG9 513 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
KCNMA1-262ENST00000639489 BRAPQ7Z569 592 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 PHKBQ93100 1093 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 EXOC1Q9NV70 894 aa17■□□□□ 0.31
KCNMA1-262ENST00000639489 ZNF532Q9HCE3 1301 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 MYO1BO43795 1136 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 CALM1P0DP23 149 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 CALM2P0DP24 149 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 CALM3P0DP25 149 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 TRIM21P19474 475 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 TAF3Q5VWG9 929 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 PYM1Q9BRP8 204 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 GOLGA6L10A6NI86 522 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 RBSNQ9H1K0 784 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 EIF3JO75822 258 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 CALML3P27482 149 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 ASIC1P78348 528 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 PKP1Q13835 747 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 CHAMP1Q96JM3 812 aa16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
KCNMA1-262ENST00000639489 USP8P40818 1118 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 ZKSCAN5Q9Y2L8 839 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 GADD45BO75293 160 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 IQCEQ6IPM2 695 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 H0YHG0 523 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 CTDSPL2Q05D32 466 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 V9GY48 417 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 CHD1O14646 1710 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
KCNMA1-262ENST00000639489 PLCG2P16885 1265 aa16.97■□□□□ 0.31
KCNMA1-262ENST00000639489 LEKR1Q6ZMV7 388 aa16.97■□□□□ 0.31
KCNMA1-262ENST00000639489 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
KCNMA1-262ENST00000639489 KDRP35968 1356 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms