RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 PDE8BO95263 885 aa18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 PARP10Q53GL7 1025 aa18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 TAF6LQ9Y6J9 622 aa18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
KCNMA1-260ENST00000639483 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 ALG1Q9BT22 464 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 MTMR6Q9Y217 621 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 KNDC1Q76NI1 1749 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 M0R2C6 588 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 MARCKSP29966 332 aaPredicted RBP18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 TPD52L1Q16890 204 aaPredicted RBP18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 SPATA5Q8NB90 893 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 ZDHHC9Q9Y397 364 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 SMC2O95347 1197 aa18.89■□□□□ 0.61
KCNMA1-260ENST00000639483 FILIP1Q7Z7B0 1213 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 MKNK2Q9HBH9 465 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 BRMS1Q9HCU9 246 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 WTAPQ15007 396 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 IQCA1Q86XH1 822 aa18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
KCNMA1-260ENST00000639483 AKAP12Q02952 1782 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 SCARF1Q14162 830 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 PDIA4P13667 645 aaKnown RBP18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 JMYQ8N9B5 988 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 EPB41L2O43491 1005 aaKnown RBP18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 ADCY5O95622 1261 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 ZMYM1Q5SVZ6 1142 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
KCNMA1-260ENST00000639483 F8W031 263 aaPredicted RBP18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 PDE6AP16499 860 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 RBM5P52756 815 aaKnown RBP eCLIP18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 SSRP1Q08945 709 aaKnown RBP18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 PHKBQ93100 1093 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 MAGEB6P1A0A0J9YX57 407 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 PDILTQ8N807 584 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 DSCC1Q9BVC3 393 aa18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 ZSCAN16Q9H4T2 348 aaPredicted RBP18.86■□□□□ 0.61
KCNMA1-260ENST00000639483 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 TSPY2A6NKD2 308 aa18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 NAT10Q9H0A0 1025 aaKnown RBP18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
KCNMA1-260ENST00000639483 CIAO1O76071 339 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 ZNF165P49910 485 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 CHRNDQ07001 517 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 VSIG10Q8N0Z9 540 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 SCRN1Q12765 414 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 ERCC4Q92889 916 aaPredicted RBP18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
KCNMA1-260ENST00000639483 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.61
KCNMA1-260ENST00000639483 MCAMP43121 646 aa18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 MROH5Q6ZUA9 1318 aa18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 ANO6Q4KMQ2 910 aa18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 CMTR1Q8N1G2 835 aaKnown RBP18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 DNAJC25Q9H1X3 360 aa18.83■□□□□ 0.6
KCNMA1-260ENST00000639483 ERFEQ4G0M1 354 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 OLFM4Q6UX06 510 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 hCG_1642624A0A1W2PR95 340 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 ADD1P35611 737 aaKnown RBP18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 ZSCAN29Q8IWY8 852 aaPredicted RBP18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 GPR108Q9NPR9 543 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 RTN1Q16799 776 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 TTC6Q86TZ1 520 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 CEP57L1Q8IYX8 460 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 TTC14Q96N46 770 aa18.82■□□□□ 0.6
KCNMA1-260ENST00000639483 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 CCDC196A0A1B0GTZ2 297 aa18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 NYXQ9GZU5 481 aa18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 ANGEL1Q9UNK9 670 aaKnown RBP18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 ESR2Q92731 530 aa18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 KRT23Q9C075 422 aa18.81■□□□□ 0.6
KCNMA1-260ENST00000639483 SETD1AO15047 1707 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms