RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
KCNMA1-240ENST00000638575 SEMA3EO15041 775 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 LMNB1P20700 586 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 EYA3Q99504 573 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
KCNMA1-240ENST00000638575 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
KCNMA1-240ENST00000638575 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.4
KCNMA1-240ENST00000638575 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-240ENST00000638575 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-240ENST00000638575 ZNRF3Q9ULT6 936 aa12.52□□□□□ -0.4
KCNMA1-240ENST00000638575 LAMA4Q16363 1823 aa12.52□□□□□ -0.4
KCNMA1-240ENST00000638575 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 ZAP70P43403 619 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 CXCL9Q07325 125 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 CHGBP05060 677 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 ZC3H12CQ9C0D7 883 aaKnown RBP12.52□□□□□ -0.41
KCNMA1-240ENST00000638575 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 POTECB2RU33 542 aa12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 IFIT2P09913 472 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 STRIP1Q5VSL9 837 aa12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 ZBED3Q96IU2 234 aaPredicted RBP12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 LAMB1P07942 1786 aa12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
KCNMA1-240ENST00000638575 CAVIN4Q5BKX8 364 aa12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 PSMD14O00487 310 aa12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 KCNJ4P48050 445 aa12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-240ENST00000638575 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 GPR162Q16538 588 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 SCNN1DP51172 638 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 IL25Q9H293 177 aa12.49□□□□□ -0.41
KCNMA1-240ENST00000638575 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 BMP2KLQ5H9B9 411 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 GAKO14976 1311 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 PRDX5P30044 214 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 FOXP2O15409 715 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 IGSF3O75054 1194 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 SDSP20132 328 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 MRIQ9BWK5 157 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 SUGT1Q9Y2Z0 365 aa12.48□□□□□ -0.41
KCNMA1-240ENST00000638575 GTF2IP78347 998 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 POLR2AP24928 1970 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
KCNMA1-240ENST00000638575 GPC2Q8N158 579 aa12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 RAD17O75943 681 aa12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 EGFRP00533 1210 aa12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 MTMR14Q8NCE2 650 aa12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
KCNMA1-240ENST00000638575 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.42
KCNMA1-240ENST00000638575 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.42
KCNMA1-240ENST00000638575 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
KCNMA1-240ENST00000638575 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 MYH1P12882 1939 aa12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 GOLIM4O00461 696 aa12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 ADD2P35612 726 aa12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 MECOMQ03112 1051 aa12.45□□□□□ -0.42
KCNMA1-240ENST00000638575 DPF2Q92785 391 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms