RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 C15orf52Q6ZUT6 534 aaKnown RBP9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 IL17RAQ96F46 866 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 SYT17Q9BSW7 474 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 TMX4Q9H1E5 349 aaPredicted RBP9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 PODXL2Q9NZ53 605 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 HMG20BQ9P0W2 317 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 MED23Q9ULK4 1368 aa9.07□□□□□ -0.96
PTP4A1-206ENST00000627002 CCDC171Q6TFL3 1326 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 H0YIN7 160 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 IGSF3O75054 1194 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 HIBADHP31937 336 aaKnown RBP9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 HSPA4P34932 840 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 GYG1P46976 350 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 MAP3K12Q12852 859 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 APPBP2Q92624 585 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 FAM84BQ96KN1 310 aaPredicted RBP9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 KIF2CQ99661 725 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 FHDC1Q9C0D6 1143 aaPredicted RBP9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 IL25Q9H293 177 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 ANTXR1Q9H6X2 564 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 GGA1Q9UJY5 639 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 ATP6V0A2Q9Y487 856 aa9.06□□□□□ -0.96
PTP4A1-206ENST00000627002 ADD2P35612 726 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 PTGER2P43116 358 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 GPSM2P81274 684 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 UBE3CQ15386 1083 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 TMED8Q6PL24 325 aaPredicted RBP9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 ZNF804AQ7Z570 1209 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 C2CD5Q86YS7 1000 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 HSCBQ8IWL3 235 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 SNX21Q969T3 373 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 PIH1D3Q9NQM4 214 aaKnown RBP9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 IRS2Q9Y4H2 1338 aa9.05□□□□□ -0.96
PTP4A1-206ENST00000627002 ST18O60284 1047 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 FRAT2O75474 233 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 UFL1O94874 794 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 CD44P16070 742 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 PDE6AP16499 860 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 ZKSCAN1P17029 563 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 PTH1RQ03431 593 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 GPR162Q16538 588 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 ZNF589Q86UQ0 364 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 KCNB2Q92953 911 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 CNKSR1Q969H4 720 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 ZNF622Q969S3 477 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 LRP2BPQ9P2M1 347 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 RBM8AQ9Y5S9 174 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 C10orf71Q711Q0 1435 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 CASZ1Q86V15 1759 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 MAST3O60307 1309 aa9.04□□□□□ -0.96
PTP4A1-206ENST00000627002 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 WTIPA6NIX2 430 aaPredicted RBP9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 KLRK1P26718 216 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 TBC1D16Q8TBP0 767 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 OSBP2Q969R2 916 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 SEC62Q99442 399 aaKnown RBP9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 PDGFDQ9GZP0 370 aaPredicted RBP9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 ZNF532Q9HCE3 1301 aa9.03□□□□□ -0.96
PTP4A1-206ENST00000627002 A0A1B0GUL6 1792 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 TCRBV5S4A2TA0A5A2 114 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 C6orf229H3BNL8 230 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 M0R2C6 588 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 PSMA5P28066 241 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 POLD1P28340 1107 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 MCM2P49736 904 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 KRT32Q14532 448 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 CREB3L3Q68CJ9 461 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 PRPF40BQ6NWY9 871 aaKnown RBP9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 DPP8Q6V1X1 898 aaPredicted RBP9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 MPNDQ8N594 471 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 TDRD7Q8NHU6 1098 aaKnown RBP9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 WDR66Q8TBY9 1149 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 EYA3Q99504 573 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 CTNNA3Q9UI47 895 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 IQSEC3Q9UPP2 1182 aaPredicted RBP9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 SNX14Q9Y5W7 946 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 SALL1Q9NSC2 1324 aa9.02□□□□□ -0.97
PTP4A1-206ENST00000627002 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms