RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SLC9C2Q5TAH2 1124 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 CDC37L1Q7L3B6 337 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 FBXL16Q8N461 479 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 LLPHQ9BRT6 129 aaKnown RBP23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 CNTNAP4Q9C0A0 1308 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 MYO5AQ9Y4I1 1855 aaKnown RBP23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 SYCE3A1L190 88 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 SCRN1Q12765 414 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 PTF1AQ7RTS3 328 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 RGL2O15211 777 aa23.31■■□□□ 1.32
PCDHB11-202ENST00000624887 FIBPO43427 364 aa23.31■■□□□ 1.32
PCDHB11-202ENST00000624887 JAK2O60674 1132 aa23.31■■□□□ 1.32
PCDHB11-202ENST00000624887 NHSQ6T4R5 1651 aa23.3■■□□□ 1.32
PCDHB11-202ENST00000624887 IDH1O75874 414 aaKnown RBP23.3■■□□□ 1.32
PCDHB11-202ENST00000624887 SMARCC2Q8TAQ2 1214 aa23.3■■□□□ 1.32
PCDHB11-202ENST00000624887 APOBRQ0VD83 1088 aa23.29■■□□□ 1.32
PCDHB11-202ENST00000624887 SPATA5Q8NB90 893 aa23.29■■□□□ 1.32
PCDHB11-202ENST00000624887 ZNF274Q96GC6 653 aaPredicted RBP23.29■■□□□ 1.32
PCDHB11-202ENST00000624887 RBSNQ9H1K0 784 aa23.29■■□□□ 1.32
PCDHB11-202ENST00000624887 PHF14O94880 888 aa23.28■■□□□ 1.32
PCDHB11-202ENST00000624887 PDE6AP16499 860 aa23.28■■□□□ 1.32
PCDHB11-202ENST00000624887 FAM43AQ8N2R8 423 aa23.28■■□□□ 1.32
PCDHB11-202ENST00000624887 ZNF532Q9HCE3 1301 aa23.28■■□□□ 1.32
PCDHB11-202ENST00000624887 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 TCRBV5S4A2TA0A5A2 114 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 SNAP23O00161 211 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 EVCP57679 992 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 HAND2P61296 217 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 KRT85P78386 507 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 RASGRF1Q13972 1273 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 FERMT3Q86UX7 667 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 DOCK2Q92608 1830 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 ZNF213O14771 459 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 RC3H1Q5TC82 1133 aaKnown RBP23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 NSUN7Q8NE18 718 aaKnown RBP23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 CDC5LQ99459 802 aaKnown RBP23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
PCDHB11-202ENST00000624887 KCNQ4P56696 695 aa23.26■■□□□ 1.31
PCDHB11-202ENST00000624887 CHST3Q7LGC8 479 aa23.26■■□□□ 1.31
PCDHB11-202ENST00000624887 CHMP4CQ96CF2 233 aa23.26■■□□□ 1.31
PCDHB11-202ENST00000624887 BTAF1O14981 1849 aa23.26■■□□□ 1.31
PCDHB11-202ENST00000624887 PDIA3P30101 505 aaKnown RBP23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 CHRNDQ07001 517 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 SF3B3Q15393 1217 aaKnown RBP23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 ERFEQ4G0M1 354 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 MB21D2Q8IYB1 491 aaPredicted RBP23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 CTDNEP1O95476 244 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 MCM5P33992 734 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 HMGN5P82970 282 aaKnown RBP23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 CCDC183Q5T5S1 534 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 NCOA7Q8NI08 942 aa23.25■■□□□ 1.31
PCDHB11-202ENST00000624887 CCDC173Q0VFZ6 552 aa23.24■■□□□ 1.31
PCDHB11-202ENST00000624887 FAM184AQ8NB25 1140 aa23.24■■□□□ 1.31
PCDHB11-202ENST00000624887 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
PCDHB11-202ENST00000624887 ELP1O95163 1332 aa23.24■■□□□ 1.31
PCDHB11-202ENST00000624887 WDR19Q8NEZ3 1342 aa23.24■■□□□ 1.31
PCDHB11-202ENST00000624887 MAP3K12Q12852 859 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 DDX11Q96FC9 970 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 PPP1R9BQ96SB3 815 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 COL4A1P02462 1669 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 RPS6KA4O75676 772 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 BCL2L12Q9HB09 334 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 SALL1Q9NSC2 1324 aa23.23■■□□□ 1.31
PCDHB11-202ENST00000624887 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 PTPDC1A2A3K4 754 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 PRC1O43663 620 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 BCAMP50895 628 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 CCT2P78371 535 aaKnown RBP23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 RALYLQ86SE5 291 aaKnown RBP23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 NARFQ9UHQ1 456 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 KIF3AQ9Y496 699 aa23.22■■□□□ 1.31
PCDHB11-202ENST00000624887 H3BQV1 296 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 LETM1O95202 739 aaPredicted RBP23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 SLC10A5Q5PT55 438 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 IFFO2Q5TF58 517 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 FAM173BQ6P4H8 233 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 C3orf67Q6ZVT6 689 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 TTC6Q86TZ1 520 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 ANKRD18AQ8IVF6 992 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 AIDAQ96BJ3 306 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 SCAND2PQ9GZW5 306 aaPredicted RBP23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 TSPY26PQ9H489 355 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 RESTQ13127 1097 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 ALX1Q15699 326 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 KLHL34Q8N239 644 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 NBPF3Q9H094 633 aa23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 ZSCAN16Q9H4T2 348 aaPredicted RBP23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
PCDHB11-202ENST00000624887 A0A1B0GUL6 1792 aa23.2■■□□□ 1.31
PCDHB11-202ENST00000624887 ZMYM6O95789 1325 aa23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 ANTXR2P58335 489 aa23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 MAGEB6Q8N7X4 407 aa23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 BSDC1Q9NW68 430 aaPredicted RBP23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 NAP1L2Q9ULW6 460 aaPredicted RBP23.2■■□□□ 1.3
PCDHB11-202ENST00000624887 APPP05067 770 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms