RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 C8orf58Q8NAV2 365 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 PPP2R2CQ9Y2T4 447 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 SAMM50Q9Y512 469 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 A0A1W2PRG0 241 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 CCDC151A5D8V7 595 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 HGSO14964 777 aaPredicted RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 KIF1CO43896 1103 aaKnown RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 TSPYL6Q8N831 410 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 BLMP54132 1417 aaPredicted RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 VAMP4O75379 141 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 FGFR1OPO95684 399 aaKnown RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 ZC3H6P61129 1189 aaKnown RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 LONRF3Q496Y0 759 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 TTC14Q96N46 770 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 TRIM6Q9C030 488 aaPredicted RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 ST7Q9NRC1 585 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 ZNF213O14771 459 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 PPFIA4O75335 1185 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 CCDC170Q8IYT3 715 aa14.85□□□□□ -0.03
COL1A2-213ENST00000620463 TDRD7Q8NHU6 1098 aaKnown RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
COL1A2-213ENST00000620463 TTC19Q6DKK2 380 aaPredicted RBP14.84□□□□□ -0.03
COL1A2-213ENST00000620463 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 ALG1Q9BT22 464 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 CXorf56Q9H5V9 222 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 RNF40O75150 1001 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
COL1A2-213ENST00000620463 SETDB1Q15047 1291 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 CTNNBL1Q8WYA6 563 aaPredicted RBP14.84□□□□□ -0.03
COL1A2-213ENST00000620463 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 IDH1O75874 414 aaKnown RBP14.84□□□□□ -0.03
COL1A2-213ENST00000620463 MXRA7P84157 204 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 UBXN1Q04323 297 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 SLFNL1Q499Z3 407 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 TRIM68Q6AZZ1 485 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 FAM114A1Q8IWE2 563 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 STMN4Q9H169 189 aaPredicted RBP14.84□□□□□ -0.03
COL1A2-213ENST00000620463 CYP2C19P33261 490 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 TESK2Q96S53 571 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 TSG101Q99816 390 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 SELENOOQ9BVL4 669 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 PARD6BQ9BYG5 372 aa14.84□□□□□ -0.03
COL1A2-213ENST00000620463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■■■ 96.1
COL1A2-213ENST00000620463 SCAF11Q99590 1463 aaKnown RBP14.83□□□□□ -0.03
COL1A2-213ENST00000620463 G3V3G9 751 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 CCT6AP40227 531 aaKnown RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 METAP2P50579 478 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ADKP55263 362 aaKnown RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ATL3Q6DD88 541 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ATP8B2P98198 1209 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ZBTB16Q05516 673 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ZKSCAN8Q15776 578 aaPredicted RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 CLTAP09496 248 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 IFIT1P09914 478 aaKnown RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 MYL6BP14649 208 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 TNNC1P63316 161 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 ESCO1Q5FWF5 840 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 RPUSD2Q8IZ73 545 aaKnown RBP14.83□□□□□ -0.04
COL1A2-213ENST00000620463 CACNA2D3Q8IZS8 1091 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 TRIM7Q9C029 511 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
COL1A2-213ENST00000620463 SRLQ86TD4 932 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 DHX58Q96C10 678 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 TPX2Q9ULW0 747 aaKnown RBP14.82□□□□□ -0.04
COL1A2-213ENST00000620463 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 SUDS3Q9H7L9 328 aaPredicted RBP14.82□□□□□ -0.04
COL1A2-213ENST00000620463 GBP1P32455 592 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 IFT88Q13099 833 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 SUFUQ9UMX1 484 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 NFE2L3Q9Y4A8 694 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 SMIM24O75264 130 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 NLRP12P59046 1061 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
COL1A2-213ENST00000620463 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 MTMR6Q9Y217 621 aa14.82□□□□□ -0.04
COL1A2-213ENST00000620463 IFIT3O14879 490 aaKnown RBP14.81□□□□□ -0.04
COL1A2-213ENST00000620463 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
COL1A2-213ENST00000620463 IFI16Q16666 785 aaKnown RBP14.81□□□□□ -0.04
COL1A2-213ENST00000620463 CCDC40Q4G0X9 1142 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 SRGAP1Q7Z6B7 1085 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 RGS22Q8NE09 1264 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 ANKRD24Q8TF21 1146 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 APOBRQ0VD83 1088 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 KCNK9Q9NPC2 374 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 FAM114A2Q9NRY5 505 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 SLFN14P0C7P3 912 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 IFT20Q8IY31 132 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 ANKRD7Q92527 254 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 STMN2Q93045 179 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 AIDAQ96BJ3 306 aa14.81□□□□□ -0.04
COL1A2-213ENST00000620463 SLF1Q9BQI6 1058 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms