RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ADKP55263 362 aaKnown RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 RCOR1Q9UKL0 485 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ANKRD62A6NC57 917 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 WASLO00401 505 aaPredicted RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 PRR29P0C7W0 189 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 NCBP1Q09161 790 aaKnown RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 SMIM24O75264 130 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PSMC1P62191 440 aaKnown RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 BRD3Q15059 726 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 A0A0D9SFI3 127 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CTAGE9A4FU28 777 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 NDC80O14777 642 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PI16Q6UXB8 463 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 KCNJ14Q9UNX9 436 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 HFM1A2PYH4 1435 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 TTLL7Q6ZT98 887 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SPATA32Q96LK8 384 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PARD6BQ9BYG5 372 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 FOXP2O15409 715 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 GNAI3P08754 354 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SEPT6Q14141 434 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 LRRC24Q50LG9 513 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 JAG2Q9Y219 1238 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 WASHC4Q2M389 1173 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 LZICQ8WZA0 190 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PPP6R1Q9UPN7 881 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PLEKHH2Q8IVE3 1493 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CDKL5O76039 1030 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 MAP3K9P80192 1104 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 NFATC2IPQ8NCF5 419 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 AOPEPQ8N6M6 819 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CCDC57Q2TAC2 916 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ARMCX5Q6P1M9 558 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 F13A1P00488 732 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SFPQP23246 707 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEB-220ENST00000618972 ZSWIM6Q9HCJ5 1215 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SLC4A8Q2Y0W8 1093 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ALDH1L2Q3SY69 923 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CLEC17AQ6ZS10 378 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 ECM2O94769 699 aaPredicted RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 AFMP43652 599 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ELF2Q15723 593 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 BEND3Q5T5X7 828 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 RNF187Q5TA31 235 aaPredicted RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 RASIP1Q5U651 963 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SLU7O95391 586 aaKnown RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 NUCKS1Q9H1E3 243 aaKnown RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 DEUP1Q05D60 604 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 E2F4Q16254 413 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 LMBR1LQ6UX01 489 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 NCOA2Q15596 1464 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 IRX5P78411 483 aaPredicted RBP3.49□□□□□ -1.85
NEB-220ENST00000618972 MTF1Q14872 753 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ZNF827Q17R98 1081 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 USP28Q96RU2 1077 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 ECHDC1Q9NTX5 307 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 CCDC171Q6TFL3 1326 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 PPIP5K1Q6PFW1 1433 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 DESP17661 470 aa3.49□□□□□ -1.85
NEB-220ENST00000618972 SGSM2O43147 1006 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ACTN4O43707 911 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 DESI2Q9BSY9 194 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CDC37Q16543 378 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 IFT20Q8IY31 132 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ZNF530Q6P9A1 599 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 GOPCQ9HD26 462 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TACC3Q9Y6A5 838 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TEX33O43247 280 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ATP2A2P16615 1042 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 TEX9Q8N6V9 391 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PIP4K2CQ8TBX8 421 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 SMARCAL1Q9NZC9 954 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 GPTP24298 496 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PRPHP41219 470 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CACNA2D3Q8IZS8 1091 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TAF4BQ92750 862 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ME1P48163 572 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 STOX1Q6ZVD7 989 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PCK1P35558 622 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 EIF4A1P60842 406 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 TOB2Q14106 344 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 PRKAB2O43741 272 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 LGSNQ5TDP6 509 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CACNA2D4Q7Z3S7 1137 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 FAM69CQ0P6D2 419 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 Q6ZUG5 572 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NBPF5PQ86XG9 351 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 WDR24Q96S15 920 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CWC25Q9NXE8 425 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 ORC3Q9UBD5 711 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 KCNG1Q9UIX4 513 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 V9GY48 417 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 RNF8O76064 485 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 GRIN1Q05586 938 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 FAM182AQ5T1J6 154 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 SH3GL3Q99963 347 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 SH2B1Q9NRF2 756 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms