RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 CNPY2Q9Y2B0 182 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 ADGRL3Q9HAR2 1447 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 GNAT2P19087 354 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 CCDC173Q0VFZ6 552 aa11.67□□□□□ -0.54
SMARCA1-205ENST00000617310 KCNQ2O43526 872 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 USP8P40818 1118 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 BEND3Q5T5X7 828 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 FAM173BQ6P4H8 233 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 ABCC3O15438 1527 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 WDR66Q8TBY9 1149 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 PTPDC1A2A3K4 754 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 GNAQP50148 359 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 EHMT1Q9H9B1 1298 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 SNAP23O00161 211 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 PPP1R12BO60237 982 aaPredicted RBP11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 DLGAP5Q15398 846 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
SMARCA1-205ENST00000617310 SERPINB2P05120 415 aa11.65□□□□□ -0.54
SMARCA1-205ENST00000617310 SPDYE3A6NKU9 549 aa11.65□□□□□ -0.54
SMARCA1-205ENST00000617310 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.54
SMARCA1-205ENST00000617310 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
SMARCA1-205ENST00000617310 ANO10Q9NW15 660 aa11.65□□□□□ -0.54
SMARCA1-205ENST00000617310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.544e-8■■■■□ 19.8
SMARCA1-205ENST00000617310 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.55
SMARCA1-205ENST00000617310 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.55
SMARCA1-205ENST00000617310 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.55
SMARCA1-205ENST00000617310 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.55
SMARCA1-205ENST00000617310 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 ALDH1B1P30837 517 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 PHKA1P46020 1223 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC178Q5BJE1 867 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 A2ML1A8K2U0 1454 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 ADORA1P30542 326 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CHRNDQ07001 517 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC183Q5T5S1 534 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC181Q5TID7 509 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 BIN2Q9UBW5 565 aaPredicted RBP11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 FAM135BQ49AJ0 1406 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 MCM7P33993 719 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 MTIF2P46199 727 aaKnown RBP11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC148Q8NFR7 591 aa11.64□□□□□ -0.55
SMARCA1-205ENST00000617310 MMP10P09238 476 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 PDE6BP35913 854 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 SYKP43405 635 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 CCDC40Q4G0X9 1142 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 RUFY1Q96T51 708 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 DBNDD1Q9H9R9 158 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 TRIM75PA6NK02 468 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 ANAPC15P60006 121 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 TCHPQ9BT92 498 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 USP26Q9BXU7 913 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 PICK1Q9NRD5 415 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 ZNF165P49910 485 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 DHX58Q96C10 678 aa11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 V9GY48 417 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-205ENST00000617310 ARAP3Q8WWN8 1544 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 EPB41L2O43491 1005 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TNNT1P13805 278 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 LETM2Q2VYF4 491 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 PHKBQ93100 1093 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 BICD1Q96G01 975 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 MACROD2A1Z1Q3 448 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 SGSM2O43147 1006 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TSG101Q99816 390 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms