RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ZSCAN12O43309 604 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 ZNF202O95125 648 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 HSP90B2PQ58FF3 399 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 LLPHQ9BRT6 129 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 UTP14AQ9BVJ6 771 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 GJB4Q9NTQ9 266 aa7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-206ENST00000610556 GPAA1O43292 621 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 CASQ1P31415 396 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 STX17P56962 302 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ARHGAP29Q52LW3 1261 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 NAA16Q6N069 864 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 KRT222Q8N1A0 295 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 WASF1Q92558 559 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PGBD1Q96JS3 809 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 HAUS7Q99871 368 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 XPO4Q9C0E2 1151 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 COPRSQ9NQ92 184 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 AXIN2Q9Y2T1 843 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 SHPRHQ149N8 1683 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ADGRB2O60241 1585 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ADCY9O60503 1353 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PHKG2P15735 406 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ADD1P35611 737 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 NAA30Q147X3 362 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ANO1Q5XXA6 986 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 MFSD6Q6ZSS7 791 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 MIGA1Q8NAN2 632 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 NSUN7Q8NE18 718 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 SMARCE1Q969G3 411 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 DNAJC5Q9H3Z4 198 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 ZNF215Q9UL58 517 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PCDHA7Q9UN72 937 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PREX1Q8TCU6 1659 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PFKFB2O60825 505 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 NAP1L1P55209 391 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 SMAP1Q8IYB5 467 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 CAGE1Q8TC20 777 aa7.91□□□□□ -1.14
SYNPO2-206ENST00000610556 PDIA3P30101 505 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 GTF2F1P35269 517 aaKnown RBP eCLIP7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 IGHMBP2P38935 993 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 NDUFA8P51970 172 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 DHX8Q14562 1220 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 KARSQ15046 597 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 PI16Q6UXB8 463 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 CLIC4Q9Y696 253 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 PPLO60437 1756 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 ADORA1P30542 326 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 MTX1Q13505 466 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 LRRC8AQ8IWT6 810 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 C19orf44Q9H6X5 657 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 ELP1O95163 1332 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 SALL3Q9BXA9 1300 aa7.9□□□□□ -1.14
SYNPO2-206ENST00000610556 FGAP02671 866 aa7.9□□□□□ -1.15
SYNPO2-206ENST00000610556 FANCCQ00597 558 aa7.9□□□□□ -1.15
SYNPO2-206ENST00000610556 RESTQ13127 1097 aa7.9□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-206ENST00000610556 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC196A0A1B0GTZ2 297 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 SLC5A1P13866 664 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 TXLNAP40222 546 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 WTAPQ15007 396 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 BRAPQ7Z569 592 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 APPBP2Q92624 585 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 CCDC47Q96A33 483 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 DHX58Q96C10 678 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 GNL3LQ9NVN8 582 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 KIAA1468Q9P260 1216 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 ADAMTSL3P82987 1691 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 USP31Q70CQ4 1352 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 OVOS2A0A0J9YW53 1432 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 OVOS2Q6IE36 1432 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 PDE4CQ08493 712 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 TTF1Q15361 905 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 RTN1Q16799 776 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 DPCR1Q3MIW9 517 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 AMOTL1Q8IY63 956 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 MAGEB6Q8N7X4 407 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNF397Q8NF99 534 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 DSCC1Q9BVC3 393 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 SLC4A4Q9Y6R1 1079 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 MYL5Q02045 173 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 NOL10Q9BSC4 688 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 OGFRQ9NZT2 677 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 ANGEL1Q9UNK9 670 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 CEP131Q9UPN4 1083 aa7.89□□□□□ -1.15
SYNPO2-206ENST00000610556 hCG_1642624A0A1W2PR95 340 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 IRS4O14654 1257 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 KCNA4P22459 653 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 ITGA6P23229 1130 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 KRT40Q6A162 431 aa7.88□□□□□ -1.15
SYNPO2-206ENST00000610556 ATL3Q6DD88 541 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms