RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 GCP02774 474 aa25.95■■□□□ 1.74
SHANK2-220ENST00000608988 DPCR1Q3MIW9 517 aa25.95■■□□□ 1.74
SHANK2-220ENST00000608988 ARFGEF2Q9Y6D5 1785 aa25.95■■□□□ 1.74
SHANK2-220ENST00000608988 ATP8B1O43520 1251 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 HSPD1P10809 573 aaKnown RBP25.94■■□□□ 1.74
SHANK2-220ENST00000608988 LRP10Q7Z4F1 713 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 NEDD4P46934 1319 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 FDPSP14324 419 aaKnown RBP25.94■■□□□ 1.74
SHANK2-220ENST00000608988 CMA1P23946 247 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 FOSBP53539 338 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 ETF1P62495 437 aaKnown RBP25.94■■□□□ 1.74
SHANK2-220ENST00000608988 C8orf76Q96K31 380 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 ZNF446Q9NWS9 450 aa25.94■■□□□ 1.74
SHANK2-220ENST00000608988 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.94■■□□□ 1.746e-7■■■■□ 23.6
SHANK2-220ENST00000608988 V9GYY5 206 aaPredicted RBP25.94■■□□□ 1.74
SHANK2-220ENST00000608988 A0A1B0GVL5 298 aa25.93■■□□□ 1.74
SHANK2-220ENST00000608988 RNF113AO15541 343 aaKnown RBP25.93■■□□□ 1.74
SHANK2-220ENST00000608988 MYL6BP14649 208 aa25.93■■□□□ 1.74
SHANK2-220ENST00000608988 SYT10Q6XYQ8 523 aa25.93■■□□□ 1.74
SHANK2-220ENST00000608988 NCOA5Q9HCD5 579 aaKnown RBP25.93■■□□□ 1.74
SHANK2-220ENST00000608988 WDR19Q8NEZ3 1342 aa25.92■■□□□ 1.74
SHANK2-220ENST00000608988 CASP7P55210 303 aa25.92■■□□□ 1.74
SHANK2-220ENST00000608988 NCAPHQ15003 741 aa25.92■■□□□ 1.74
SHANK2-220ENST00000608988 FBXO18Q8NFZ0 1043 aa25.92■■□□□ 1.74
SHANK2-220ENST00000608988 CALCOCO1Q9P1Z2 691 aa25.92■■□□□ 1.74
SHANK2-220ENST00000608988 SNRPA1P09661 255 aaKnown RBP25.91■■□□□ 1.74
SHANK2-220ENST00000608988 UBE3BQ7Z3V4 1068 aa25.91■■□□□ 1.74
SHANK2-220ENST00000608988 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
SHANK2-220ENST00000608988 ZNF202O95125 648 aa25.91■■□□□ 1.74
SHANK2-220ENST00000608988 MYSM1Q5VVJ2 828 aa25.91■■□□□ 1.74
SHANK2-220ENST00000608988 GOLIM4O00461 696 aa25.9■■□□□ 1.74
SHANK2-220ENST00000608988 IL15P40933 162 aaPredicted RBP25.9■■□□□ 1.74
SHANK2-220ENST00000608988 FANCCQ00597 558 aa25.9■■□□□ 1.74
SHANK2-220ENST00000608988 NDUFB9Q9Y6M9 179 aa25.9■■□□□ 1.74
SHANK2-220ENST00000608988 MAST3O60307 1309 aa25.9■■□□□ 1.74
SHANK2-220ENST00000608988 KDM6AO15550 1401 aaPredicted RBP25.89■■□□□ 1.74
SHANK2-220ENST00000608988 GUCY1B3Q02153 619 aa25.89■■□□□ 1.74
SHANK2-220ENST00000608988 ERCC6LQ2NKX8 1250 aa25.89■■□□□ 1.74
SHANK2-220ENST00000608988 SYNE3Q6ZMZ3 975 aa25.89■■□□□ 1.74
SHANK2-220ENST00000608988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.89■■□□□ 1.745e-8■□□□□ 10.7
SHANK2-220ENST00000608988 TUBE1Q9UJT0 475 aa25.89■■□□□ 1.74
SHANK2-220ENST00000608988 CLIC4Q9Y696 253 aa25.89■■□□□ 1.74
SHANK2-220ENST00000608988 DDX60Q8IY21 1712 aaKnown RBP25.89■■□□□ 1.74
SHANK2-220ENST00000608988 A0A087WWV3 80 aa25.89■■□□□ 1.73
SHANK2-220ENST00000608988 A0A087WZG4 1122 aa25.89■■□□□ 1.73
SHANK2-220ENST00000608988 ANO1Q5XXA6 986 aa25.89■■□□□ 1.73
SHANK2-220ENST00000608988 NOL10Q9BSC4 688 aaKnown RBP25.89■■□□□ 1.73
SHANK2-220ENST00000608988 NAP1L2Q9ULW6 460 aaPredicted RBP25.89■■□□□ 1.73
SHANK2-220ENST00000608988 FHOD1Q9Y613 1164 aa25.89■■□□□ 1.73
SHANK2-220ENST00000608988 CLCN6P51797 869 aa25.88■■□□□ 1.73
SHANK2-220ENST00000608988 PLBD2Q8NHP8 589 aa25.88■■□□□ 1.73
SHANK2-220ENST00000608988 TMX1Q9H3N1 280 aa25.88■■□□□ 1.73
SHANK2-220ENST00000608988 FAM237AA0A1B0GTK4 181 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 ZSCAN12O43309 604 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 CHGBP05060 677 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 AXDND1Q5T1B0 1012 aaPredicted RBP25.87■■□□□ 1.73
SHANK2-220ENST00000608988 HOMER1Q86YM7 354 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 UBXN4Q92575 508 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 DNAI1Q9UI46 699 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 LAMB4A4D0S4 1761 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 MST1RQ04912 1400 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 GOLGA6L9A6NEM1 432 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 ZFYP08048 801 aaPredicted RBP25.87■■□□□ 1.73
SHANK2-220ENST00000608988 ESCO1Q5FWF5 840 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 ATG9AQ7Z3C6 839 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 JMYQ8N9B5 988 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 PODXL2Q9NZ53 605 aa25.87■■□□□ 1.73
SHANK2-220ENST00000608988 EFCAB8A8MWE9 144 aa25.86■■□□□ 1.73
SHANK2-220ENST00000608988 H7C1W4 665 aa25.86■■□□□ 1.73
SHANK2-220ENST00000608988 ZRANB2O95218 330 aaKnown RBP eCLIP25.86■■□□□ 1.73
SHANK2-220ENST00000608988 ARHGAP29Q52LW3 1261 aa25.86■■□□□ 1.73
SHANK2-220ENST00000608988 TMCO3Q6UWJ1 677 aa25.86■■□□□ 1.73
SHANK2-220ENST00000608988 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
SHANK2-220ENST00000608988 ORC3Q9UBD5 711 aaPredicted RBP25.86■■□□□ 1.73
SHANK2-220ENST00000608988 CIAO1O76071 339 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 PNMA6AP0CW24 399 aaPredicted RBP25.85■■□□□ 1.73
SHANK2-220ENST00000608988 PFKFB1P16118 471 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 MYL5Q02045 173 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 SLC39A14Q15043 492 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 IMMTQ16891 758 aaKnown RBP25.85■■□□□ 1.73
SHANK2-220ENST00000608988 LMBR1LQ6UX01 489 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 ERCC4Q92889 916 aaPredicted RBP25.85■■□□□ 1.73
SHANK2-220ENST00000608988 FOXO4P98177 505 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 SLC39A6Q13433 755 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 ELOA2Q8IYF1 753 aaPredicted RBP25.85■■□□□ 1.73
SHANK2-220ENST00000608988 MNS1Q8NEH6 495 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 FMNL2Q96PY5 1086 aa25.85■■□□□ 1.73
SHANK2-220ENST00000608988 PPP6R2O75170 966 aa25.84■■□□□ 1.73
SHANK2-220ENST00000608988 IFIT1P09914 478 aaKnown RBP25.84■■□□□ 1.73
SHANK2-220ENST00000608988 CYP2C19P33261 490 aa25.84■■□□□ 1.73
SHANK2-220ENST00000608988 KIF23Q02241 960 aaPredicted RBP25.84■■□□□ 1.73
SHANK2-220ENST00000608988 CCDC158Q5M9N0 1113 aa25.84■■□□□ 1.73
SHANK2-220ENST00000608988 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
SHANK2-220ENST00000608988 ZNF496Q96IT1 587 aaPredicted RBP25.84■■□□□ 1.73
SHANK2-220ENST00000608988 MPHOSPH8Q99549 860 aa25.84■■□□□ 1.73
SHANK2-220ENST00000608988 ABCC12Q96J65 1359 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.83■■□□□ 1.73
SHANK2-220ENST00000608988 TADA3O75528 432 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 PHKG2P15735 406 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 TEX35Q5T0J7 233 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms