RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CCDC66A2RUB6 948 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 NEMFO60524 1076 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 KBTBD3Q8NAB2 608 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 TCEAL9Q9UHQ7 104 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 MYOM1P52179 1685 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 CPS1P31327 1500 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 SLU7O95391 586 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 NAP1L1P55209 391 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 KARSQ15046 597 aaKnown RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 CCDC102BQ68D86 513 aa11.95□□□□□ -0.5
CTCFL-216ENST00000608263 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-216ENST00000608263 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
CTCFL-216ENST00000608263 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 ARHGAP29Q52LW3 1261 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 E7EWF7 191 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 HOXB7P09629 217 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
CTCFL-216ENST00000608263 B4E1Z4 1266 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 CCP110O43303 1012 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 CAVIN2O95810 425 aa11.94□□□□□ -0.5
CTCFL-216ENST00000608263 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
CTCFL-216ENST00000608263 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 ZBTB43O43298 467 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 FAM193AP78312 1265 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 KRT222Q8N1A0 295 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 CAGE1Q8TC20 777 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 BRMS1Q9HCU9 246 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
CTCFL-216ENST00000608263 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
CTCFL-216ENST00000608263 XPO4Q9C0E2 1151 aaKnown RBP11.93□□□□□ -0.5
CTCFL-216ENST00000608263 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 CFAP74Q9C0B2 1584 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 APBA3O96018 575 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 ATP5JP18859 108 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 CASQ1P31415 396 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 SMAP1Q8IYB5 467 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-216ENST00000608263 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
CTCFL-216ENST00000608263 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 MIGA1Q8NAN2 632 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 SLC52A2Q9HAB3 445 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 CRB1P82279 1406 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 MPHOSPH10O00566 681 aaKnown RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 ZNF202O95125 648 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 USP5P45974 858 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
CTCFL-216ENST00000608263 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-216ENST00000608263 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 EYA2O00167 538 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 EPB41L2O43491 1005 aaKnown RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 ZAP70P43403 619 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 TOB2Q14106 344 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 CMTR1Q8N1G2 835 aaKnown RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 NOC3LQ8WTT2 800 aaKnown RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 NEXMIFQ5QGS0 1516 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 ZSCAN12O43309 604 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 ERCC6LQ2NKX8 1250 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 LZTFL1Q9NQ48 299 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 PCDHA7Q9UN72 937 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-216ENST00000608263 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 KDRP35968 1356 aa11.91□□□□□ -0.5
CTCFL-216ENST00000608263 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
CTCFL-216ENST00000608263 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-216ENST00000608263 NDUFA8P51970 172 aa11.9□□□□□ -0.5
CTCFL-216ENST00000608263 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
CTCFL-216ENST00000608263 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.5
CTCFL-216ENST00000608263 SMARCE1Q969G3 411 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms