RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CTAGE15	A4D2H0	777 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ECM2	O94769	699 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IL1RL1	Q01638	556 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TMED1	Q13445	227 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC92	Q53HC0	331 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SMARCC2	Q8TAQ2	1214 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIAA1524	Q8TCG1	905 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NR1H4	Q96RI1	486 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TRIM6	Q9C030	488 aa	Predicted RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TMEM2	Q9UHN6	1383 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CTAGE9	A4FU28	777 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HIP1R	O75146	1068 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NBPF11	Q86T75	865 aa		4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NOC2L	Q9Y3T9	749 aa	Known RBP	4.62	□□□□□ -1.67
KCNMA1-223	ENST00000604624	EEF2	P13639	858 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ALDH3A1	P30838	453 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CETN3	O15182	167 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	INF2	Q27J81	1249 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PPP1R21	Q6ZMI0	780 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	INTS8	Q75QN2	995 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GNL3L	Q9NVN8	582 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RASAL2	Q9UJF2	1139 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TTLL3	Q9Y4R7	772 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CDKL5	O76039	1030 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZC3H6	P61129	1189 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TSNAXIP1	Q2TAA8	658 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NBPF8	Q3BBV2	869 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MICAL1	Q8TDZ2	1067 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SIL1	Q9H173	461 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FAF1	Q9UNN5	650 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HPD	P32754	393 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SESN3	P58005	492 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LRCH2	Q5VUJ6	765 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPATS2	Q86XZ4	545 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ABTB1	Q969K4	478 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	YEATS4	O95619	227 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	LONP1	P36776	959 aa	Known RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ADAMTS13	Q76LX8	1427 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UBTFL1	P0CB47	393 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC83	Q8IWF9	413 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZNF280C	Q8ND82	737 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TMEM110-MUSTN1	A8MSY1	372 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FOXD1	Q16676	465 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC38	Q502W7	563 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PALM2	Q8IXS6	379 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC82	Q8N4S0	544 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CHMP6	Q96FZ7	201 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TRIM8	Q9BZR9	551 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CYP46A1	Q9Y6A2	500 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MAN1A2	O60476	641 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ARID5A	Q03989	594 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FLCN	Q8NFG4	579 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	VPS18	Q9P253	973 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ISM2	Q6H9L7	571 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC62	Q6P9F0	684 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MYH11	P35749	1972 aa		4.61	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NLRP5	P59047	1200 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC85B	Q15834	202 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MAP3K11	Q16584	847 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MCM10	Q7L590	875 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GBP5	Q96PP8	586 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CACTIN	Q8WUQ7	758 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MAK16	Q9BXY0	300 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NPR1	P16066	1061 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	USP6NL	Q92738	828 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TRPM1	Q7Z4N2	1603 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TLDC2	A0PJX2	215 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	OCM2	P0CE71	109 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	OCM	P0CE72	109 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CTAGE8	P0CG41	777 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ANKRD1	Q15327	319 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HIF1A	Q16665	826 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MUM1	Q2TAK8	710 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RAB11FIP4	Q86YS3	637 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CTAGE4	Q8IX94	777 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ANKAR	Q7Z5J8	1434 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DYTN	A2CJ06	578 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DNAJC8	O75937	253 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FOXD4	Q12950	439 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IFT81	Q8WYA0	676 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TACO1	Q9BSH4	297 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPC25	Q9HBM1	224 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624		E9PCH4	1651 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ASXL1	Q8IXJ9	1541 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FRMD3	A2A2Y4	597 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GTPBP10	A4D1E9	387 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624		E7EVH7	732 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KRT10	P13645	584 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PPP1R7	Q15435	360 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KSR1	Q8IVT5	923 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RNF10	Q8N5U6	811 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IWS1	Q96ST2	819 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms