RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 CYLC1P35663 651 aaPredicted RBP3.82□□□□□ -1.8
NEB-218ENST00000603639 PLXNC1O60486 1568 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 RASSF10A6NK89 507 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 STK38Q15208 465 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 XPCQ01831 940 aaPredicted RBP3.82□□□□□ -1.8
NEB-218ENST00000603639 FAM200AQ8TCP9 573 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 NSRP1Q9H0G5 558 aaKnown RBP3.82□□□□□ -1.8
NEB-218ENST00000603639 ZFXP17010 805 aaPredicted RBP3.82□□□□□ -1.8
NEB-218ENST00000603639 PPP1R7Q15435 360 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 STX10O60499 249 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 PRLRP16471 622 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 CCNI2Q6ZMN8 369 aaPredicted RBP3.82□□□□□ -1.8
NEB-218ENST00000603639 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 PTPN23Q9H3S7 1636 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 BRD1O95696 1058 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 TROVE2P10155 538 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-218ENST00000603639 MTHFSP49914 203 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-218ENST00000603639 SCINQ9Y6U3 715 aa3.82□□□□□ -1.8
NEB-218ENST00000603639 ZNF365Q70YC5 407 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 ARL2BPQ9Y2Y0 163 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 TUBA3CQ13748 450 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 TTC27Q6P3X3 843 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CCDC150Q8NCX0 1101 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 NEK1Q96PY6 1258 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 IL9RQ01113 521 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 FKBP5Q13451 457 aaPredicted RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 DDX42Q86XP3 938 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEB-218ENST00000603639 MROH2BQ7Z745 1585 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GNA14O95837 355 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 SSRP1Q08945 709 aaKnown RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 PIBF1Q8WXW3 757 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 ATP5JP18859 108 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 ZFYVE27Q5T4F4 411 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 ATP6V0A1Q93050 837 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 DGCR14Q96DF8 476 aaKnown RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 PARD6BQ9BYG5 372 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 FRMD3A2A2Y4 597 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 SPAG1Q07617 926 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 DIXDC1Q155Q3 683 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 SCOCQ9UIL1 159 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 RABGAP1Q9Y3P9 1069 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GOLGA8QA0A0J9YX86 632 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GOLGA8OA6NCC3 632 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GOLGA8NF8WBI6 632 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 ICE2Q659A1 982 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 VSIG1Q86XK7 387 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 PBKQ96KB5 322 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 NEUROD6Q96NK8 337 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 TACC3Q9Y6A5 838 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 FAM114A2Q9NRY5 505 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CMA1P23946 247 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 SYCP2LQ5T4T6 812 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 DHX32Q7L7V1 743 aaKnown RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 PPP1R1BQ9UD71 204 aaPredicted RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 SHROOM2Q13796 1616 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 TANGO6Q9C0B7 1094 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 SAR1BQ9Y6B6 198 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CLTAP09496 248 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CCDC93Q567U6 631 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CMTM5Q96DZ9 223 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 PAIP2BQ9ULR5 123 aaKnown RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 GAPVD1Q14C86 1478 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 RANBP1P43487 201 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 NCAPGQ9BPX3 1015 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 KCNG4Q8TDN1 519 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 TBC1D32Q96NH3 1257 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 HVCN1Q96D96 273 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 FOXD4L6Q3SYB3 417 aaPredicted RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 FOXD4L3Q6VB84 417 aaPredicted RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 ATP2A3Q93084 1043 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 MRGBPQ9NV56 204 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 RCOR1Q9UKL0 485 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 PLEKHH1Q9ULM0 1364 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 IGSF3O75054 1194 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 AMPHP49418 695 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 RPS6KA1Q15418 735 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GRIN2BQ13224 1484 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 EPC1Q9H2F5 836 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 GRIN1Q05586 938 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CCDC144BQ3MJ40 725 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 CCDC129Q6ZRS4 1044 aa3.81□□□□□ -1.8
NEB-218ENST00000603639 HELBQ8NG08 1087 aaPredicted RBP3.81□□□□□ -1.8
NEB-218ENST00000603639 IGHDP01880 384 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 UBA7P41226 1012 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 PITPNM3Q9BZ71 974 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 TEDDM1Q5T9Z0 273 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 ACTR5Q9H9F9 607 aaPredicted RBP3.8□□□□□ -1.8
NEB-218ENST00000603639 HNRNPCL1O60812 293 aaKnown RBP3.8□□□□□ -1.8
NEB-218ENST00000603639 CCND1P24385 295 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 SYCE1Q8N0S2 351 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 CDCA7LQ96GN5 454 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 LNPKQ9C0E8 428 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 NSD2O96028 1365 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 VPS53Q5VIR6 699 aa3.8□□□□□ -1.8
NEB-218ENST00000603639 GSDMBQ8TAX9 411 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms