RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 TAOK2Q9UL54 1235 aa20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 CPLX1O14810 134 aa20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 IFIT1P09914 478 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 LMOD1P29536 600 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 ISM2Q6H9L7 571 aa20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
ARHGEF1-213ENST00000595897 HAND2P61296 217 aa20.18■□□□□ 0.82
ARHGEF1-213ENST00000595897 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
ARHGEF1-213ENST00000595897 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
ARHGEF1-213ENST00000595897 MAST3O60307 1309 aa20.18■□□□□ 0.82
ARHGEF1-213ENST00000595897 ZNF202O95125 648 aa20.18■□□□□ 0.82
ARHGEF1-213ENST00000595897 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 RAB11FIP4Q86YS3 637 aa20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 PSDA5PKW4 1024 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 RNF113AO15541 343 aaKnown RBP20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 YEATS4O95619 227 aa20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 BPIFA3Q9BQP9 254 aa20.17■□□□□ 0.82
ARHGEF1-213ENST00000595897 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 L2HGDHQ9H9P8 463 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 POLR3EQ9NVU0 708 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 NLRP12P59046 1061 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 MYSM1Q5VVJ2 828 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 ERBB3P21860 1342 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 KLF18A0A0U1RQI7 1052 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 WASHC4Q2M389 1173 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 FBXO18Q8NFZ0 1043 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 GJB4Q9NTQ9 266 aa20.16■□□□□ 0.82
ARHGEF1-213ENST00000595897 BMS1Q14692 1282 aaKnown RBP20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 ST7Q9NRC1 585 aa20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 BRAPQ7Z569 592 aa20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 ZNF446Q9NWS9 450 aa20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 DNAI1Q9UI46 699 aa20.15■□□□□ 0.82
ARHGEF1-213ENST00000595897 M0R2C6 588 aa20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 FANCCQ00597 558 aa20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 ARHGAP29Q52LW3 1261 aa20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 LRRN4CLQ8ND94 238 aa20.14■□□□□ 0.82
ARHGEF1-213ENST00000595897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.14■□□□□ 0.821e-6■■■■■ 27.8
ARHGEF1-213ENST00000595897 ERICH4A6NGS2 130 aa20.14■□□□□ 0.81
ARHGEF1-213ENST00000595897 PHKG2P15735 406 aa20.14■□□□□ 0.81
ARHGEF1-213ENST00000595897 PFKFB1P16118 471 aa20.14■□□□□ 0.81
ARHGEF1-213ENST00000595897 MARCKSP29966 332 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-213ENST00000595897 IL15P40933 162 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-213ENST00000595897 CCDC66A2RUB6 948 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 PRC1O43663 620 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 SERPINC1P01008 464 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 ATP1A3P13637 1013 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 ANO1Q5XXA6 986 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 A0A1B0GUL7 405 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 UBXN4Q92575 508 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
ARHGEF1-213ENST00000595897 CCP110O43303 1012 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 TUBB4AP04350 444 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 CASP7P55210 303 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 ETF1P62495 437 aaKnown RBP20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 NCAPHQ15003 741 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 RALYLQ86SE5 291 aaKnown RBP20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 MNS1Q8NEH6 495 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 ZNF594Q96JF6 807 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 H2AFXP16104 143 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 KCNJ6P48051 423 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 UBASH3AP57075 661 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 FOXO4P98177 505 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 LRRC24Q50LG9 513 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 FAM53CQ9NYF3 392 aa20.12■□□□□ 0.81
ARHGEF1-213ENST00000595897 CMA1P23946 247 aa20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 CLCN6P51797 869 aa20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 SYKP43405 635 aa20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 NEDD4P46934 1319 aa20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 GNL2Q13823 731 aaKnown RBP20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 NOL10Q9BSC4 688 aaKnown RBP20.11■□□□□ 0.81
ARHGEF1-213ENST00000595897 KIF28PB7ZC32 967 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 EVCP57679 992 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 GPR108Q9NPR9 543 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 ARGLU1Q9NWB6 273 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 URI1O94763 535 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 EYA2O00167 538 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 IKBKBO14920 756 aa20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 AXDND1Q5T1B0 1012 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
ARHGEF1-213ENST00000595897 KIF23Q02241 960 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 CBFA2T2O43439 604 aa20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 FGAP02671 866 aa20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms