RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FAM205AQ6ZU69 1335 aa23.48■■□□□ 1.35
DDX39A-214ENST00000590556 UQCRFS1P1P0C7P4 283 aa23.47■■□□□ 1.35
DDX39A-214ENST00000590556 GMPSP49915 693 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-214ENST00000590556 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-214ENST00000590556 DENND2AQ9ULE3 1009 aa23.47■■□□□ 1.35
DDX39A-214ENST00000590556 ZBTB12Q9Y330 459 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-214ENST00000590556 MYH13Q9UKX3 1938 aa23.47■■□□□ 1.35
DDX39A-214ENST00000590556 RPS12P25398 132 aaKnown RBP23.46■■□□□ 1.35
DDX39A-214ENST00000590556 MXD3Q9BW11 206 aa23.46■■□□□ 1.35
DDX39A-214ENST00000590556 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 ZBTB22O15209 634 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 ARID4AP29374 1257 aaPredicted RBP23.45■■□□□ 1.34
DDX39A-214ENST00000590556 RASGRF1Q13972 1273 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 B4GALNT3Q6L9W6 998 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 AGBL3Q8NEM8 1001 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 GPBP1L1Q9HC44 474 aaPredicted RBP23.45■■□□□ 1.34
DDX39A-214ENST00000590556 WDR90Q96KV7 1748 aa23.45■■□□□ 1.34
DDX39A-214ENST00000590556 LMOD1P29536 600 aaPredicted RBP23.44■■□□□ 1.34
DDX39A-214ENST00000590556 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
DDX39A-214ENST00000590556 ERICH6BQ5W0A0 696 aa23.44■■□□□ 1.34
DDX39A-214ENST00000590556 TBC1D22AQ8WUA7 517 aa23.44■■□□□ 1.34
DDX39A-214ENST00000590556 DPF2Q92785 391 aa23.44■■□□□ 1.34
DDX39A-214ENST00000590556 RRAGCQ9HB90 399 aa23.44■■□□□ 1.34
DDX39A-214ENST00000590556 ZNF646O15015 1829 aaPredicted RBP23.44■■□□□ 1.34
DDX39A-214ENST00000590556 SCNN1DP51172 638 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 MFSD14BQ5SR56 506 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 ZNF784Q8NCA9 323 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-214ENST00000590556 WDR66Q8TBY9 1149 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 ZNF512BQ96KM6 892 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-214ENST00000590556 GMLQ99445 158 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 GPRC5DQ9NZD1 345 aa23.43■■□□□ 1.34
DDX39A-214ENST00000590556 IQCA1LA6NCM1 817 aa23.42■■□□□ 1.34
DDX39A-214ENST00000590556 CERS5Q8N5B7 392 aa23.42■■□□□ 1.34
DDX39A-214ENST00000590556 SPATA5Q8NB90 893 aa23.42■■□□□ 1.34
DDX39A-214ENST00000590556 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
DDX39A-214ENST00000590556 CNOT7Q9UIV1 285 aaKnown RBP23.42■■□□□ 1.34
DDX39A-214ENST00000590556 HACL1Q9UJ83 578 aa23.42■■□□□ 1.34
DDX39A-214ENST00000590556 COL1A1P02452 1464 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-214ENST00000590556 PDS5AQ29RF7 1337 aaKnown RBP23.41■■□□□ 1.34
DDX39A-214ENST00000590556 POTECB2RU33 542 aa23.41■■□□□ 1.34
DDX39A-214ENST00000590556 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-214ENST00000590556 MCAMP43121 646 aa23.41■■□□□ 1.34
DDX39A-214ENST00000590556 NUCB1Q02818 461 aa23.41■■□□□ 1.34
DDX39A-214ENST00000590556 SCARF1Q14162 830 aa23.41■■□□□ 1.34
DDX39A-214ENST00000590556 C16orf71Q8IYS4 520 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-214ENST00000590556 SCN4AP35499 1836 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 H7C1D1 291 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 EPS15P42566 896 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 CHD1LQ86WJ1 897 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 KIAA0825Q8IV33 1275 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 MICALL2Q8IY33 904 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 GPATCH3Q96I76 525 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 CCDC136Q96JN2 1154 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 LNPKQ9C0E8 428 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 SNRKQ9NRH2 765 aa23.4■■□□□ 1.34
DDX39A-214ENST00000590556 PI16Q6UXB8 463 aa23.39■■□□□ 1.33
DDX39A-214ENST00000590556 SHTN1A0MZ66 631 aa23.38■■□□□ 1.33
DDX39A-214ENST00000590556 F8W031 263 aaPredicted RBP23.38■■□□□ 1.33
DDX39A-214ENST00000590556 EPHX2P34913 555 aa23.38■■□□□ 1.33
DDX39A-214ENST00000590556 OGFOD1Q8N543 542 aa23.38■■□□□ 1.33
DDX39A-214ENST00000590556 OTUD7AQ8TE49 926 aaPredicted RBP23.38■■□□□ 1.33
DDX39A-214ENST00000590556 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
DDX39A-214ENST00000590556 AKAP11Q9UKA4 1901 aa23.37■■□□□ 1.33
DDX39A-214ENST00000590556 SALL1Q9NSC2 1324 aa23.37■■□□□ 1.33
DDX39A-214ENST00000590556 ATP5JP18859 108 aa23.37■■□□□ 1.33
DDX39A-214ENST00000590556 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
DDX39A-214ENST00000590556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.37■■□□□ 1.33
DDX39A-214ENST00000590556 TAF1DQ9H5J8 278 aaPredicted RBP23.37■■□□□ 1.33
DDX39A-214ENST00000590556 HDAC9Q9UKV0 1011 aa23.37■■□□□ 1.33
DDX39A-214ENST00000590556 SUGT1Q9Y2Z0 365 aa23.37■■□□□ 1.33
DDX39A-214ENST00000590556 ZAP70P43403 619 aa23.36■■□□□ 1.33
DDX39A-214ENST00000590556 MMP14P50281 582 aa23.36■■□□□ 1.33
DDX39A-214ENST00000590556 ZNF280AP59817 542 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-214ENST00000590556 GRIK5Q16478 980 aa23.36■■□□□ 1.33
DDX39A-214ENST00000590556 ADARB2Q9NS39 739 aaKnown RBP23.36■■□□□ 1.33
DDX39A-214ENST00000590556 PPP4R2Q9NY27 417 aa23.36■■□□□ 1.33
DDX39A-214ENST00000590556 ABCF2Q9UG63 623 aa23.36■■□□□ 1.33
DDX39A-214ENST00000590556 TTF2Q9UNY4 1162 aaKnown RBP23.36■■□□□ 1.33
DDX39A-214ENST00000590556 LDHBP07195 334 aaKnown RBP23.35■■□□□ 1.33
DDX39A-214ENST00000590556 MX1P20591 662 aa23.35■■□□□ 1.33
DDX39A-214ENST00000590556 SPTY2D1Q68D10 685 aaPredicted RBP23.35■■□□□ 1.33
DDX39A-214ENST00000590556 CENPQQ7L2Z9 268 aaPredicted RBP23.35■■□□□ 1.33
DDX39A-214ENST00000590556 RBM26Q5T8P6 1007 aaKnown RBP23.34■■□□□ 1.33
DDX39A-214ENST00000590556 TBC1D9Q6ZT07 1266 aa23.34■■□□□ 1.33
DDX39A-214ENST00000590556 SAMD7Q7Z3H4 446 aa23.34■■□□□ 1.33
DDX39A-214ENST00000590556 BOLA2Q9H3K6 86 aa23.34■■□□□ 1.33
DDX39A-214ENST00000590556 TTC41PQ6P2S7 1318 aa23.33■■□□□ 1.33
DDX39A-214ENST00000590556 CYP2E1P05181 493 aaPredicted RBP23.33■■□□□ 1.33
DDX39A-214ENST00000590556 PRDX5P30044 214 aa23.33■■□□□ 1.33
DDX39A-214ENST00000590556 TBC1D10BQ4KMP7 808 aaPredicted RBP23.33■■□□□ 1.33
DDX39A-214ENST00000590556 TSHZ3Q63HK5 1081 aa23.33■■□□□ 1.33
DDX39A-214ENST00000590556 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.33
DDX39A-214ENST00000590556 PNMA8AQ86V59 439 aaPredicted RBP23.33■■□□□ 1.33
DDX39A-214ENST00000590556 MYOZ2Q9NPC6 264 aa23.33■■□□□ 1.33
DDX39A-214ENST00000590556 NDUFB9Q9Y6M9 179 aa23.33■■□□□ 1.33
DDX39A-214ENST00000590556 MAST3O60307 1309 aa23.33■■□□□ 1.32
DDX39A-214ENST00000590556 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.32
DDX39A-214ENST00000590556 ERC2O15083 957 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms