RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 ANKRD18BA2A2Z9 1011 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
VPS25-205ENST00000590339 RAD17O75943 681 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 ITGA6P23229 1130 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 LMOD1P29536 600 aaPredicted RBP11.36□□□□□ -0.59
VPS25-205ENST00000590339 HSPA4P34932 840 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 EPS15P42566 896 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 CXCL9Q07325 125 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
VPS25-205ENST00000590339 RTFDC1Q9BY42 306 aaPredicted RBP11.36□□□□□ -0.59
VPS25-205ENST00000590339 BOLA2Q9H3K6 86 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
VPS25-205ENST00000590339 A0A1B0GUL7 405 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
VPS25-205ENST00000590339 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 LDHDQ86WU2 507 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 KCNB2Q92953 911 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
VPS25-205ENST00000590339 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 G3V3G9 751 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
VPS25-205ENST00000590339 CIAPIN1Q6FI81 312 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
VPS25-205ENST00000590339 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
VPS25-205ENST00000590339 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 FSD1Q9BTV5 496 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 DBNDD1Q9H9R9 158 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
VPS25-205ENST00000590339 COL4A5P29400 1685 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 SCNN1DP51172 638 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 KBTBD3Q8NAB2 608 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 KLRG1Q96E93 195 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 EDC3Q96F86 508 aaKnown RBP11.33□□□□□ -0.6
VPS25-205ENST00000590339 FAM227BQ96M60 508 aa11.33□□□□□ -0.6
VPS25-205ENST00000590339 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
VPS25-205ENST00000590339 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 ST18O60284 1047 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 UFL1O94874 794 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 FGFR2P21802 821 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 ADORA1P30542 326 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
VPS25-205ENST00000590339 TIMM10P62072 90 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 PTH1RQ03431 593 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 TNIP1Q15025 636 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
VPS25-205ENST00000590339 EYA3Q99504 573 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 ZC3H12CQ9C0D7 883 aaKnown RBP11.32□□□□□ -0.6
VPS25-205ENST00000590339 KCNQ5Q9NR82 932 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
VPS25-205ENST00000590339 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
VPS25-205ENST00000590339 MROH5Q6ZUA9 1318 aa11.32□□□□□ -0.6
VPS25-205ENST00000590339 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 NEUROD6Q96NK8 337 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 CDC5LQ99459 802 aaKnown RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 CHMP5Q9NZZ3 219 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 GGA1Q9UJY5 639 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 TAF1P21675 1872 aa11.31□□□□□ -0.6
VPS25-205ENST00000590339 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
VPS25-205ENST00000590339 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 SHTN1A0MZ66 631 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 ECE2O60344 883 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 PDE8BO95263 885 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
VPS25-205ENST00000590339 MCM2P49736 904 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS25-205ENST00000590339 NECTIN1Q15223 517 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
VPS25-205ENST00000590339 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
VPS25-205ENST00000590339 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms