RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 RAB6BQ9NRW1 208 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 CHD4Q14839 1912 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 SBNO2Q9Y2G9 1366 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 MYOM1P52179 1685 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 NHSQ6T4R5 1651 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 EDC4Q6P2E9 1401 aaKnown RBP7.78□□□□□ -1.16
DNMT1-220ENST00000589351 NFAT5O94916 1531 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 GNB5O14775 395 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 FBXO45P0C2W1 286 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 SLCO4C1Q6ZQN7 724 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 ZCRB1Q8TBF4 217 aaKnown RBP7.78□□□□□ -1.16
DNMT1-220ENST00000589351 LTV1Q96GA3 475 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-220ENST00000589351 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
DNMT1-220ENST00000589351 BMP4P12644 408 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 CENPCQ03188 943 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 DOC2BQ14184 412 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 ZNF827Q17R98 1081 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 RUBCNLQ9H714 662 aa7.77□□□□□ -1.17
DNMT1-220ENST00000589351 MON2Q7Z3U7 1717 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 A0A1B0GTH6 734 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 CTBSQ01459 385 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 RNF20Q5VTR2 975 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 RAPGEF4Q8WZA2 1011 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 CNKSR1Q969H4 720 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 ABHD17AQ96GS6 310 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 PCDHB11Q9Y5F2 797 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 LTN1O94822 1766 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 CGNL1Q0VF96 1302 aa7.76□□□□□ -1.17
DNMT1-220ENST00000589351 BTAF1O14981 1849 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 ANKRD36BQ8N2N9 1353 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 USP47Q96K76 1375 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 PIK3R2O00459 728 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 IL2RAP01589 272 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 DGKGP49619 791 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 ZMYM1Q5SVZ6 1142 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 CCNL1Q9UK58 526 aaPredicted RBP7.75□□□□□ -1.17
DNMT1-220ENST00000589351 ATXN7L1Q9ULK2 861 aaPredicted RBP7.75□□□□□ -1.17
DNMT1-220ENST00000589351 PNPLA7Q6ZV29 1317 aa7.75□□□□□ -1.17
DNMT1-220ENST00000589351 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 EPXP11678 715 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 TATP17735 454 aaPredicted RBP7.74□□□□□ -1.17
DNMT1-220ENST00000589351 FGFR3P22607 806 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 HOXC9P31274 260 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 RFC5P40937 340 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 LBRQ14739 615 aaKnown RBP7.74□□□□□ -1.17
DNMT1-220ENST00000589351 FAM117AQ9C073 453 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 NDFIP2Q9NV92 336 aa7.74□□□□□ -1.17
DNMT1-220ENST00000589351 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 A0A1W2PP64 1363 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
DNMT1-220ENST00000589351 BNIP3LO60238 219 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 MSX1P28360 303 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 PGBD3Q8N328 593 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
DNMT1-220ENST00000589351 NOP53Q9NZM5 478 aaKnown RBP7.73□□□□□ -1.17
DNMT1-220ENST00000589351 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 MAP3K19Q56UN5 1328 aa7.73□□□□□ -1.17
DNMT1-220ENST00000589351 FAM208AQ9UK61 1670 aaKnown RBP7.73□□□□□ -1.17
DNMT1-220ENST00000589351 QSER1Q2KHR3 1735 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 PAPPAQ13219 1627 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 GNRH1P01148 92 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 KCNQ4P56696 695 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 TMF1P82094 1093 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 CDCA8Q53HL2 280 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 RNF135Q8IUD6 432 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 SMARCC1Q92922 1105 aaPredicted RBP7.72□□□□□ -1.17
DNMT1-220ENST00000589351 CD163L1Q9NR16 1453 aa7.72□□□□□ -1.17
DNMT1-220ENST00000589351 ST20-MTHFSA0A0A6YYL1 179 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 COL23A1Q86Y22 540 aaPredicted RBP7.71□□□□□ -1.18
DNMT1-220ENST00000589351 NLGN2Q8NFZ4 835 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 NBPF4Q96M43 638 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
DNMT1-220ENST00000589351 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 RTL1A6NKG5 1358 aa7.71□□□□□ -1.18
DNMT1-220ENST00000589351 ARAFP10398 606 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 GNASQ5JWF2 1037 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
DNMT1-220ENST00000589351 MPRIPQ6WCQ1 1025 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 XAGE2Q96GT9 111 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 KDM4CQ9H3R0 1056 aa7.7□□□□□ -1.18
DNMT1-220ENST00000589351 NSD3Q9BZ95 1437 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 FYB1O15117 783 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 FBLN1P23142 703 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 RRS1Q15050 365 aaKnown RBP7.69□□□□□ -1.18
DNMT1-220ENST00000589351 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
DNMT1-220ENST00000589351 MSL1Q68DK7 614 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms