RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
SAFB-205ENST00000588852 ZAP70P43403 619 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 CCZ1BP86790 482 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 CCZ1P86791 482 aaPredicted RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 NBPF11Q86T75 865 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 CCDC112Q8NEF3 446 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 ZNF396Q96N95 335 aaPredicted RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 TRPM3Q9HCF6 1732 aaPredicted RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 MARCKSP29966 332 aaPredicted RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 SF3A1Q15459 793 aaKnown RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 HPS5Q9UPZ3 1129 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 UBE2Q2LH0YL09 131 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 PRC1O43663 620 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 LINC00301Q8NCQ3 95 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
SAFB-205ENST00000588852 XAGE2Q96GT9 111 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 MRFAP1L1Q96HT8 127 aa17.8■□□□□ 0.44
SAFB-205ENST00000588852 GOLGA8BA8MQT2 603 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 ANTXR2P58335 489 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 STK38Q15208 465 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
SAFB-205ENST00000588852 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 ANO10Q9NW15 660 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 C8orf76Q96K31 380 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.79■□□□□ 0.447e-8■■■□□ 14.6
SAFB-205ENST00000588852 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 ORC3Q9UBD5 711 aaPredicted RBP17.79■□□□□ 0.44
SAFB-205ENST00000588852 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
SAFB-205ENST00000588852 TTC39AQ5SRH9 613 aa17.78■□□□□ 0.44
SAFB-205ENST00000588852 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
SAFB-205ENST00000588852 ZNF215Q9UL58 517 aaPredicted RBP17.78■□□□□ 0.44
SAFB-205ENST00000588852 NEDD4P46934 1319 aa17.78■□□□□ 0.44
SAFB-205ENST00000588852 CTAGE5O15320 804 aa17.78■□□□□ 0.44
SAFB-205ENST00000588852 CDC25BP30305 580 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 XPO4Q9C0E2 1151 aaKnown RBP17.77■□□□□ 0.44
SAFB-205ENST00000588852 SMC2O95347 1197 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 IFNKQ9P0W0 207 aa17.77■□□□□ 0.44
SAFB-205ENST00000588852 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
SAFB-205ENST00000588852 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 ATF3P18847 181 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
SAFB-205ENST00000588852 DMTNQ08495 405 aa17.76■□□□□ 0.43
SAFB-205ENST00000588852 CPLX1O14810 134 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 SPTLC2O15270 562 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 ZNF202O95125 648 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 CAVIN2O95810 425 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 LMOD1P29536 600 aaPredicted RBP17.75■□□□□ 0.43
SAFB-205ENST00000588852 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
SAFB-205ENST00000588852 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 PHKBQ93100 1093 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 GOLGA8FQ08AF8 430 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 GOLGA8DPQ0D2H9 430 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 NYAP1Q6ZVC0 841 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 TMC6Q7Z403 805 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SAFB-205ENST00000588852 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 LRRN4CLQ8ND94 238 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
SAFB-205ENST00000588852 MYH15Q9Y2K3 1946 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 GPAA1O43292 621 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 GPTP24298 496 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 ARMCX5Q6P1M9 558 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 CCAR2Q8N163 923 aaKnown RBP17.74■□□□□ 0.43
SAFB-205ENST00000588852 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 CTNNA3Q9UI47 895 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 MROH7-TTC4A0A0A0MT08 1334 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
SAFB-205ENST00000588852 ZNF213O14771 459 aa17.73■□□□□ 0.43
SAFB-205ENST00000588852 PFKFB1P16118 471 aa17.73■□□□□ 0.43
SAFB-205ENST00000588852 TAF7LQ5H9L4 462 aa17.73■□□□□ 0.43
SAFB-205ENST00000588852 ZCRB1Q8TBF4 217 aaKnown RBP17.73■□□□□ 0.43
SAFB-205ENST00000588852 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
SAFB-205ENST00000588852 NWD2Q9ULI1 1742 aa17.73■□□□□ 0.43
SAFB-205ENST00000588852 APPP05067 770 aa17.72■□□□□ 0.43
SAFB-205ENST00000588852 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
SAFB-205ENST00000588852 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
SAFB-205ENST00000588852 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
SAFB-205ENST00000588852 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
SAFB-205ENST00000588852 GLI3P10071 1580 aa17.72■□□□□ 0.43
SAFB-205ENST00000588852 MCAMP43121 646 aa17.72■□□□□ 0.43
SAFB-205ENST00000588852 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
SAFB-205ENST00000588852 ZRSR1Q15695 479 aaKnown RBP17.72■□□□□ 0.43
SAFB-205ENST00000588852 SPECC1Q5M775 1068 aa17.72■□□□□ 0.43
SAFB-205ENST00000588852 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms