RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 KCNB2Q92953 911 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SMAD4-205ENST00000588745 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 IQSEC3Q9UPP2 1182 aaPredicted RBP13.7□□□□□ -0.22
SMAD4-205ENST00000588745 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 UFL1O94874 794 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 PDE6AP16499 860 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 SLC9C2Q5TAH2 1124 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 GGA1Q9UJY5 639 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
SMAD4-205ENST00000588745 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
SMAD4-205ENST00000588745 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 ST18O60284 1047 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
SMAD4-205ENST00000588745 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 DSCC1Q9BVC3 393 aa13.68□□□□□ -0.22
SMAD4-205ENST00000588745 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
SMAD4-205ENST00000588745 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 TCRBV5S4A2TA0A5A2 114 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 H0YIN7 160 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
SMAD4-205ENST00000588745 SLC27A2O14975 620 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
SMAD4-205ENST00000588745 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 TBC1D16Q8TBP0 767 aa13.67□□□□□ -0.22
SMAD4-205ENST00000588745 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
SMAD4-205ENST00000588745 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
SMAD4-205ENST00000588745 GPAA1O43292 621 aa13.66□□□□□ -0.22
SMAD4-205ENST00000588745 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
SMAD4-205ENST00000588745 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
SMAD4-205ENST00000588745 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
SMAD4-205ENST00000588745 MAGEB6Q8N7X4 407 aa13.66□□□□□ -0.22
SMAD4-205ENST00000588745 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
SMAD4-205ENST00000588745 LRP2BPQ9P2M1 347 aa13.66□□□□□ -0.22
SMAD4-205ENST00000588745 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
SMAD4-205ENST00000588745 NEK4P51957 841 aa13.65□□□□□ -0.22
SMAD4-205ENST00000588745 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
SMAD4-205ENST00000588745 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMAD4-205ENST00000588745 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
SMAD4-205ENST00000588745 ABCF2Q9UG63 623 aa13.65□□□□□ -0.22
SMAD4-205ENST00000588745 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
SMAD4-205ENST00000588745 CHRNA5P30532 468 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
SMAD4-205ENST00000588745 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
SMAD4-205ENST00000588745 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
SMAD4-205ENST00000588745 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 CCDC88AQ3V6T2 1871 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 LAMA4Q16363 1823 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 SLX4Q8IY92 1834 aa13.64□□□□□ -0.23
SMAD4-205ENST00000588745 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 C6orf229H3BNL8 230 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 FOXP2O15409 715 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 MCM2P49736 904 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
SMAD4-205ENST00000588745 MPNDQ8N594 471 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD4-205ENST00000588745 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
SMAD4-205ENST00000588745 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
SMAD4-205ENST00000588745 IGSF3O75054 1194 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 CYP21A2P08686 494 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 IL1R1P14778 569 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
SMAD4-205ENST00000588745 PSMA5P28066 241 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 KRT32Q14532 448 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 ADCK5Q3MIX3 580 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
SMAD4-205ENST00000588745 DPP8Q6V1X1 898 aaPredicted RBP13.62□□□□□ -0.23
SMAD4-205ENST00000588745 ZGPATQ8N5A5 531 aaKnown RBP13.62□□□□□ -0.23
SMAD4-205ENST00000588745 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
SMAD4-205ENST00000588745 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 MBD4O95243 580 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 CYP7A1P22680 504 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 WDR66Q8TBY9 1149 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 TTC14Q96N46 770 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 STRBPQ96SI9 672 aaKnown RBP13.61□□□□□ -0.23
SMAD4-205ENST00000588745 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 ZMYM6O95789 1325 aa13.61□□□□□ -0.23
SMAD4-205ENST00000588745 SPTY2D1Q68D10 685 aaPredicted RBP13.6□□□□□ -0.23
SMAD4-205ENST00000588745 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
SMAD4-205ENST00000588745 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 LCORLQ8N3X6 602 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms