RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
RETREG3-203ENST00000585894 CCDC102BQ68D86 513 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 TRPM4Q8TD43 1214 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 EAF2Q96CJ1 260 aaPredicted RBP15.57■□□□□ 0.08
RETREG3-203ENST00000585894 GMLQ99445 158 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 DBNDD2Q9BQY9 259 aa15.57■□□□□ 0.08
RETREG3-203ENST00000585894 CCDC8Q9H0W5 538 aaPredicted RBP15.57■□□□□ 0.08
RETREG3-203ENST00000585894 F8W031 263 aaPredicted RBP15.56■□□□□ 0.08
RETREG3-203ENST00000585894 GRIK5Q16478 980 aa15.56■□□□□ 0.08
RETREG3-203ENST00000585894 RBM26Q5T8P6 1007 aaKnown RBP15.56■□□□□ 0.08
RETREG3-203ENST00000585894 KIAA0825Q8IV33 1275 aa15.56■□□□□ 0.08
RETREG3-203ENST00000585894 C16orf71Q8IYS4 520 aaPredicted RBP15.56■□□□□ 0.08
RETREG3-203ENST00000585894 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-203ENST00000585894 RPS12P25398 132 aaKnown RBP15.55■□□□□ 0.08
RETREG3-203ENST00000585894 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
RETREG3-203ENST00000585894 AGBL3Q8NEM8 1001 aa15.55■□□□□ 0.08
RETREG3-203ENST00000585894 DPF2Q92785 391 aa15.55■□□□□ 0.08
RETREG3-203ENST00000585894 DBNLQ9UJU6 430 aaKnown RBP15.55■□□□□ 0.08
RETREG3-203ENST00000585894 FAM205AQ6ZU69 1335 aa15.55■□□□□ 0.08
RETREG3-203ENST00000585894 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 GORABQ5T7V8 394 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 AACSQ86V21 672 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 ERC1Q8IUD2 1116 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 GPR108Q9NPR9 543 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 AKAP11Q9UKA4 1901 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 H7C1D1 291 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 HIRAP54198 1017 aaPredicted RBP15.54■□□□□ 0.08
RETREG3-203ENST00000585894 RASGRF1Q13972 1273 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 MFSD14BQ5SR56 506 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 PI16Q6UXB8 463 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 DCTPP1Q9H773 170 aa15.54■□□□□ 0.08
RETREG3-203ENST00000585894 ADARB2Q9NS39 739 aaKnown RBP15.54■□□□□ 0.08
RETREG3-203ENST00000585894 POLR2AP24928 1970 aaKnown RBP15.54■□□□□ 0.08
RETREG3-203ENST00000585894 USP17L8P0C7I0 530 aa15.53■□□□□ 0.08
RETREG3-203ENST00000585894 SCARF1Q14162 830 aa15.53■□□□□ 0.08
RETREG3-203ENST00000585894 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
RETREG3-203ENST00000585894 ASTN2O75129 1339 aaPredicted RBP15.53■□□□□ 0.08
RETREG3-203ENST00000585894 MYO5AQ9Y4I1 1855 aaKnown RBP15.53■□□□□ 0.08
RETREG3-203ENST00000585894 TOMM70O94826 608 aa15.52■□□□□ 0.08
RETREG3-203ENST00000585894 GNL3LQ9NVN8 582 aaKnown RBP15.52■□□□□ 0.08
RETREG3-203ENST00000585894 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
RETREG3-203ENST00000585894 MYO3BQ8WXR4 1341 aa15.52■□□□□ 0.07
RETREG3-203ENST00000585894 RAB11FIP3O75154 756 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 ZNF280AP59817 542 aaPredicted RBP15.51■□□□□ 0.07
RETREG3-203ENST00000585894 KIF4BQ2VIQ3 1234 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
RETREG3-203ENST00000585894 PNMA8AQ86V59 439 aaPredicted RBP15.51■□□□□ 0.07
RETREG3-203ENST00000585894 CLASRPQ8N2M8 674 aaKnown RBP15.51■□□□□ 0.07
RETREG3-203ENST00000585894 LRRCC1Q9C099 1032 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 MYOZ2Q9NPC6 264 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 SNRKQ9NRH2 765 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 HMG20BQ9P0W2 317 aa15.51■□□□□ 0.07
RETREG3-203ENST00000585894 IGHDP01880 384 aa15.5■□□□□ 0.07
RETREG3-203ENST00000585894 MCAMP43121 646 aa15.5■□□□□ 0.07
RETREG3-203ENST00000585894 TTC39AQ5SRH9 613 aa15.5■□□□□ 0.07
RETREG3-203ENST00000585894 USP50Q70EL3 339 aaPredicted RBP15.5■□□□□ 0.07
RETREG3-203ENST00000585894 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
RETREG3-203ENST00000585894 RBM46Q8TBY0 533 aaKnown RBP15.5■□□□□ 0.07
RETREG3-203ENST00000585894 TTF2Q9UNY4 1162 aaKnown RBP15.5■□□□□ 0.07
RETREG3-203ENST00000585894 NDUFB9Q9Y6M9 179 aa15.5■□□□□ 0.07
RETREG3-203ENST00000585894 ARID4AP29374 1257 aaPredicted RBP15.49■□□□□ 0.07
RETREG3-203ENST00000585894 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
RETREG3-203ENST00000585894 HDAC1Q13547 482 aaPredicted RBP15.49■□□□□ 0.07
RETREG3-203ENST00000585894 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
RETREG3-203ENST00000585894 DENND2AQ9ULE3 1009 aa15.49■□□□□ 0.07
RETREG3-203ENST00000585894 SCAF8Q9UPN6 1271 aaKnown RBP15.49■□□□□ 0.07
RETREG3-203ENST00000585894 AOX1Q06278 1338 aa15.49■□□□□ 0.07
RETREG3-203ENST00000585894 SEMA3EO15041 775 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 PRDX5P30044 214 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 NBPF9Q3BBW0 867 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 TBC1D9Q6ZT07 1266 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 SPATA5Q8NB90 893 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 TBC1D22AQ8WUA7 517 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 ECM29Q5VYK3 1845 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 CENPBP07199 599 aaPredicted RBP15.48■□□□□ 0.07
RETREG3-203ENST00000585894 IFIT2P09913 472 aaKnown RBP15.48■□□□□ 0.07
RETREG3-203ENST00000585894 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 FMR1Q06787 632 aaKnown RBP eCLIP15.48■□□□□ 0.07
RETREG3-203ENST00000585894 AAMPQ13685 434 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 DLK2Q6UY11 383 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 SMC1BQ8NDV3 1235 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
RETREG3-203ENST00000585894 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
RETREG3-203ENST00000585894 ABCF2Q9UG63 623 aa15.47■□□□□ 0.07
RETREG3-203ENST00000585894 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
RETREG3-203ENST00000585894 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
RETREG3-203ENST00000585894 WNT10BO00744 389 aa15.46■□□□□ 0.07
RETREG3-203ENST00000585894 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.07
RETREG3-203ENST00000585894 CFAP100Q494V2 611 aa15.46■□□□□ 0.07
RETREG3-203ENST00000585894 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
RETREG3-203ENST00000585894 OTUD7AQ8TE49 926 aaPredicted RBP15.46■□□□□ 0.07
RETREG3-203ENST00000585894 GGA3Q9NZ52 723 aa15.46■□□□□ 0.07
RETREG3-203ENST00000585894 TRAF5O00463 557 aa15.46■□□□□ 0.06
RETREG3-203ENST00000585894 ZAP70P43403 619 aa15.46■□□□□ 0.06
RETREG3-203ENST00000585894 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms