RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 GOLIM4O00461 696 aa20.29■□□□□ 0.84
CDK5RAP3-230ENST00000584042 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
CDK5RAP3-230ENST00000584042 FSD1Q9BTV5 496 aa20.29■□□□□ 0.84
CDK5RAP3-230ENST00000584042 NDUFB9Q9Y6M9 179 aa20.29■□□□□ 0.84
CDK5RAP3-230ENST00000584042 CHD4Q14839 1912 aa20.28■□□□□ 0.84
CDK5RAP3-230ENST00000584042 HIP1O00291 1037 aa20.28■□□□□ 0.84
CDK5RAP3-230ENST00000584042 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-230ENST00000584042 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
CDK5RAP3-230ENST00000584042 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
CDK5RAP3-230ENST00000584042 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 CYP2E1P05181 493 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 CASC1Q6TDU7 716 aa20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 WWC3Q9ULE0 1092 aa20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 IQSEC3Q9UPP2 1182 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-230ENST00000584042 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 IGSF3O75054 1194 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 FRAT2O75474 233 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 LRRFIP1Q32MZ4 808 aaKnown RBP20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 SCN9AQ15858 1988 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 COL4A5P29400 1685 aa20.26■□□□□ 0.83
CDK5RAP3-230ENST00000584042 NFKBIEO00221 500 aa20.25■□□□□ 0.83
CDK5RAP3-230ENST00000584042 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
CDK5RAP3-230ENST00000584042 PODNQ7Z5L7 613 aa20.25■□□□□ 0.83
CDK5RAP3-230ENST00000584042 FAM205AQ6ZU69 1335 aa20.25■□□□□ 0.83
CDK5RAP3-230ENST00000584042 RAD50Q92878 1312 aa20.25■□□□□ 0.83
CDK5RAP3-230ENST00000584042 EIF5BO60841 1220 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 CHMLP26374 656 aa20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 AOC3Q16853 763 aa20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.835e-14■■□□□ 11.9
CDK5RAP3-230ENST00000584042 PIH1D3Q9NQM4 214 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ECE2O60344 883 aa20.23■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ZFYP08048 801 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-230ENST00000584042 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-230ENST00000584042 BACH2Q9BYV9 841 aa20.23■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-230ENST00000584042 G3V3G9 751 aa20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DCAF8Q5TAQ9 597 aa20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ZSCAN25Q6NSZ9 544 aa20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 TMED8Q6PL24 325 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 TBC1D22AQ8WUA7 517 aa20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-230ENST00000584042 MAP3K12Q12852 859 aa20.21■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
CDK5RAP3-230ENST00000584042 DBNDD1Q9H9R9 158 aa20.21■□□□□ 0.83
CDK5RAP3-230ENST00000584042 IDH1O75874 414 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-230ENST00000584042 SPTY2D1Q68D10 685 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-230ENST00000584042 LARGE2Q8N3Y3 721 aa20.2■□□□□ 0.82
CDK5RAP3-230ENST00000584042 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
CDK5RAP3-230ENST00000584042 TIAM2Q8IVF5 1701 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ADD2P35612 726 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 FKBP1AP62942 108 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 NIM1KQ8IY84 436 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 LRP2BPQ9P2M1 347 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 SUGT1Q9Y2Z0 365 aa20.19■□□□□ 0.82
CDK5RAP3-230ENST00000584042 SBF1O95248 1867 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 A0A0D9SFI3 127 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 PDE6AP16499 860 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 RASSF7Q02833 373 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ZMYM1Q5SVZ6 1142 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 APPBP2Q92624 585 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ABCF2Q9UG63 623 aa20.18■□□□□ 0.82
CDK5RAP3-230ENST00000584042 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 SGSM2O43147 1006 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 GTF2IP78347 998 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 STRIP1Q5VSL9 837 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 JAG2Q9Y219 1238 aa20.17■□□□□ 0.82
CDK5RAP3-230ENST00000584042 TCRBV5S4A2TA0A5A2 114 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 YDJCA8MPS7 323 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 PRDX5P30044 214 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 SLC9C2Q5TAH2 1124 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 TTLL5Q6EMB2 1281 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 FAM227BQ96M60 508 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
CDK5RAP3-230ENST00000584042 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 REC8O95072 547 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 LDHBP07195 334 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 YBX3P16989 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 MAGEB6Q8N7X4 407 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 JDP2Q8WYK2 163 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 ZNRF3Q9ULT6 936 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 MAST3O60307 1309 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms