RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
GGA3-213ENST00000582486 A0A1B0GUL6 1792 aa13.36□□□□□ -0.27
GGA3-213ENST00000582486 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
GGA3-213ENST00000582486 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
GGA3-213ENST00000582486 KLRK1P26718 216 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 GRAPQ13588 217 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
GGA3-213ENST00000582486 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
GGA3-213ENST00000582486 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
GGA3-213ENST00000582486 ANKRD2Q9GZV1 360 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 LARGE1O95461 756 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 MCM4P33991 863 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 NUCB2P80303 420 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 MAP3K12Q12852 859 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 VPS37DQ86XT2 251 aa13.35□□□□□ -0.27
GGA3-213ENST00000582486 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
GGA3-213ENST00000582486 FGAP02671 866 aa13.34□□□□□ -0.27
GGA3-213ENST00000582486 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
GGA3-213ENST00000582486 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
GGA3-213ENST00000582486 CRY2Q49AN0 593 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
GGA3-213ENST00000582486 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
GGA3-213ENST00000582486 ME3Q16798 604 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
GGA3-213ENST00000582486 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
GGA3-213ENST00000582486 E7EWF7 191 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 AIDAQ96BJ3 306 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 SH2B1Q9NRF2 756 aaPredicted RBP13.32□□□□□ -0.28
GGA3-213ENST00000582486 ANKIB1Q9P2G1 1089 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
GGA3-213ENST00000582486 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
GGA3-213ENST00000582486 HAND2P61296 217 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 STRBPQ96SI9 672 aaKnown RBP13.31□□□□□ -0.28
GGA3-213ENST00000582486 DENND2AQ9ULE3 1009 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 HIBADHP31937 336 aaKnown RBP13.31□□□□□ -0.28
GGA3-213ENST00000582486 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
GGA3-213ENST00000582486 Q6ZUG5 572 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
GGA3-213ENST00000582486 GBP4Q96PP9 640 aa13.31□□□□□ -0.28
GGA3-213ENST00000582486 APPP05067 770 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
GGA3-213ENST00000582486 ST3GAL1Q11201 340 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 DHX32Q7L7V1 743 aaKnown RBP13.3□□□□□ -0.28
GGA3-213ENST00000582486 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 LRRC2Q9BYS8 371 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
GGA3-213ENST00000582486 MBD4O95243 580 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 PNPLA7Q6ZV29 1317 aa13.3□□□□□ -0.28
GGA3-213ENST00000582486 TNS1Q9HBL0 1735 aaKnown RBP13.29□□□□□ -0.28
GGA3-213ENST00000582486 ZNF213O14771 459 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 DTNBO60941 627 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 FBXO41Q8TF61 875 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
GGA3-213ENST00000582486 SEMA3EO15041 775 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
GGA3-213ENST00000582486 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
GGA3-213ENST00000582486 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
GGA3-213ENST00000582486 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 XDHP47989 1333 aa13.29□□□□□ -0.28
GGA3-213ENST00000582486 LAMA4Q16363 1823 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 BRD1O95696 1058 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 CYP7A1P22680 504 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 HOXA10P31260 410 aaPredicted RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 GPSM2P81274 684 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 ADGRA1Q86SQ6 560 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
GGA3-213ENST00000582486 DDX11L8A8MPP1 907 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 BBOX1O75936 387 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 MMP10P09238 476 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 FGD1P98174 961 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 STK3Q13188 491 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
GGA3-213ENST00000582486 BRF1Q92994 677 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms