RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
MKS1-211ENST00000581761 TGFB2P61812 414 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
MKS1-211ENST00000581761 ADCK5Q3MIX3 580 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 APPBP2Q92624 585 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 DSCC1Q9BVC3 393 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
MKS1-211ENST00000581761 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 MINPP1Q9UNW1 487 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 CPA1P15085 419 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 CHRNA5P30532 468 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 BCAMP50895 628 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 OSBP2Q969R2 916 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
MKS1-211ENST00000581761 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 CHD4Q14839 1912 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 RPAP1Q9BWH6 1393 aaPredicted RBP17.48■□□□□ 0.39
MKS1-211ENST00000581761 TAF1P21675 1872 aa17.48■□□□□ 0.39
MKS1-211ENST00000581761 AK2P54819 239 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 ST5P78524 1137 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 CUL4AQ13619 759 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 KRT32Q14532 448 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 RUFY3Q7L099 469 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 MYH7P12883 1935 aa17.47■□□□□ 0.39
MKS1-211ENST00000581761 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
MKS1-211ENST00000581761 ADD2P35612 726 aa17.46■□□□□ 0.39
MKS1-211ENST00000581761 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
MKS1-211ENST00000581761 VPS53Q5VIR6 699 aa17.46■□□□□ 0.39
MKS1-211ENST00000581761 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
MKS1-211ENST00000581761 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
MKS1-211ENST00000581761 GNL3LQ9NVN8 582 aaKnown RBP17.46■□□□□ 0.39
MKS1-211ENST00000581761 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
MKS1-211ENST00000581761 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
MKS1-211ENST00000581761 SLC9C2Q5TAH2 1124 aa17.45■□□□□ 0.38
MKS1-211ENST00000581761 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
MKS1-211ENST00000581761 PDE6AP16499 860 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 GRAPQ13588 217 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 UBE3CQ15386 1083 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
MKS1-211ENST00000581761 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
MKS1-211ENST00000581761 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
MKS1-211ENST00000581761 CYP21A2P08686 494 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 RPS6KB1P23443 525 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 GYG1P46976 350 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 NUCB2P80303 420 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 MAP3K12Q12852 859 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 CAVIN4Q5BKX8 364 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 ZNF784Q8NCA9 323 aaPredicted RBP17.43■□□□□ 0.38
MKS1-211ENST00000581761 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
MKS1-211ENST00000581761 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
MKS1-211ENST00000581761 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
MKS1-211ENST00000581761 GPAA1O43292 621 aa17.42■□□□□ 0.38
MKS1-211ENST00000581761 VPS37DQ86XT2 251 aa17.42■□□□□ 0.38
MKS1-211ENST00000581761 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
MKS1-211ENST00000581761 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
MKS1-211ENST00000581761 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
MKS1-211ENST00000581761 NEK1Q96PY6 1258 aa17.42■□□□□ 0.38
MKS1-211ENST00000581761 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
MKS1-211ENST00000581761 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
MKS1-211ENST00000581761 MAGEB6Q8N7X4 407 aa17.41■□□□□ 0.38
MKS1-211ENST00000581761 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
MKS1-211ENST00000581761 LARP6Q9BRS8 491 aaKnown RBP17.41■□□□□ 0.38
MKS1-211ENST00000581761 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
MKS1-211ENST00000581761 DOCK2Q92608 1830 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
MKS1-211ENST00000581761 MCM4P33991 863 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 PDE6BP35913 854 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
MKS1-211ENST00000581761 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
MKS1-211ENST00000581761 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
MKS1-211ENST00000581761 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
MKS1-211ENST00000581761 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.38
MKS1-211ENST00000581761 H0YIN7 160 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 SRGNP10124 158 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 STOX1Q6ZVD7 989 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 GBP4Q96PP9 640 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
MKS1-211ENST00000581761 BRCA1P38398 1863 aaKnown RBP17.38■□□□□ 0.37
MKS1-211ENST00000581761 FOXP2O15409 715 aa17.38■□□□□ 0.37
MKS1-211ENST00000581761 LARGE1O95461 756 aa17.38■□□□□ 0.37
MKS1-211ENST00000581761 KLRK1P26718 216 aa17.38■□□□□ 0.37
MKS1-211ENST00000581761 COL9A3Q14050 684 aaPredicted RBP17.38■□□□□ 0.37
MKS1-211ENST00000581761 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
MKS1-211ENST00000581761 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms