RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 STIM2Q9P246 746 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 NAA16Q6N069 864 aaPredicted RBP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 FLT4P35916 1363 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 SETDB1Q15047 1291 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 CLUL1Q15846 466 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 SEC24BO95487 1268 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
SEC22B-201ENST00000578049 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 CHMP4BP1P59074 171 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 SYCP3Q8IZU3 236 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
SEC22B-201ENST00000578049 BLMP54132 1417 aaPredicted RBP12.13□□□□□ -0.47
SEC22B-201ENST00000578049 FERP16591 822 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
SEC22B-201ENST00000578049 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC26Q8TAB7 109 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 GUCA1BQ9UMX6 200 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 MTUS1Q9ULD2 1270 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 ACEP12821 1306 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 BRD1O95696 1058 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 KRT79Q5XKE5 535 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
SEC22B-201ENST00000578049 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
SEC22B-201ENST00000578049 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
SEC22B-201ENST00000578049 UBXN1Q04323 297 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 BRD3Q15059 726 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 BICDL1Q6ZP65 573 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
SEC22B-201ENST00000578049 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 GNA11P29992 359 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 DHX58Q96C10 678 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 ZPR1O75312 459 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 KRT2P35908 639 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CYP26C1Q6V0L0 522 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 LZTFL1Q9NQ48 299 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 SGSM2O43147 1006 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 PLCD1P51178 756 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
SEC22B-201ENST00000578049 SPATS2Q86XZ4 545 aaKnown RBP12.12□□□□□ -0.47
SEC22B-201ENST00000578049 CUTAO60888 179 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 C10orf67Q8IYJ2 551 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 WDHD1O75717 1129 aaPredicted RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 HS2ST1Q7LGA3 356 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 GPR161Q8N6U8 529 aaKnown RBP12.11□□□□□ -0.47
SEC22B-201ENST00000578049 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
SEC22B-201ENST00000578049 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
SEC22B-201ENST00000578049 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 IGSF22Q8N9C0 903 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 FANCAO15360 1455 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 INPP5BP32019 993 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 FANCCQ00597 558 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
SEC22B-201ENST00000578049 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
SEC22B-201ENST00000578049 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
SEC22B-201ENST00000578049 ATP8B1O43520 1251 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms