RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 KIAA0825Q8IV33 1275 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 ANKRD35Q8N283 1001 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 CCDC191Q8NCU4 936 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 PLBD2Q8NHP8 589 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 FAM89AQ96GI7 184 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 EYA1Q99502 592 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 NAP1L4Q99733 375 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 DDX21Q9NR30 783 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 USP40Q9NVE5 1235 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 ZBBXA8MT70 800 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 KIF28PB7ZC32 967 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 NPR1P16066 1061 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 MX1P20591 662 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 NAPAP54920 295 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 EIF4A2Q14240 407 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 MFSD14BQ5SR56 506 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 CAGE1Q8TC20 777 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 FAM212AQ96EL1 285 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 PUS7Q96PZ0 661 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 GLT8D2Q9H1C3 349 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 MLXIPQ9HAP2 919 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 RNF216Q9NWF9 866 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 CFAP45Q9UL16 551 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 NOP58Q9Y2X3 529 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 SCAF11Q99590 1463 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 ZBED9Q6R2W3 1325 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 PIK3C2GO75747 1445 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 NEXMIFQ5QGS0 1516 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 MAP3K5Q99683 1374 aa3.37□□□□□ -1.87
SMCHD1-203ENST00000577880 TCP10L2B9ZVM9 353 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MYCLP12524 364 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 KRT13P13646 458 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 EZRP15311 586 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 BCAMP50895 628 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 EIF5P55010 431 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MKRN3Q13064 507 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 TXNRD1Q16881 649 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 DOK7Q18PE1 504 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 TCERG1LQ5VWI1 586 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PPFIBP1Q86W92 1011 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 RNF169Q8NCN4 708 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 EXOC6Q8TAG9 804 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 GLG1Q92896 1179 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 EVI5LQ96CN4 794 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MASTLQ96GX5 879 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 DISP2A7MBM2 1401 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MAP3K19Q56UN5 1328 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 A1BGP04217 495 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 CTNNA2P26232 953 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 GNA11P29992 359 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 USP8P40818 1118 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 USP14P54578 494 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ARID5AQ03989 594 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 NLRX1Q86UT6 975 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 CDAN1Q8IWY9 1227 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MSANTD4Q8NCY6 345 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 GOLGA1Q92805 767 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 MAP7D2Q96T17 732 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PSMD1Q99460 953 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PYM1Q9BRP8 204 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 SLC52A2Q9HAB3 445 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ANGEL1Q9UNK9 670 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ITGA6P23229 1130 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ACTN2P35609 894 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 SLC1A4P43007 532 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 RABEP1Q15276 862 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ODR4Q5SWX8 454 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 FKBP15Q5T1M5 1219 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 JAKMIP3Q5VZ66 844 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 KIAA1841Q6NSI8 718 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 HEATR3Q7Z4Q2 680 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 C8orf76Q96K31 380 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 FTOQ9C0B1 505 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 KCNG1Q9UIX4 513 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ZBTB21Q9ULJ3 1066 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 DLL1O00548 723 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 C21orf2O43822 256 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 RAD17O75943 681 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PARP1P09874 1014 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 KRT85P78386 507 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PUM3Q15397 648 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 PNMA8AQ86V59 439 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 FCHSD1Q86WN1 690 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 IFT74Q96LB3 600 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 NAP1L5Q96NT1 182 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 RSPH6AQ9H0K4 717 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 DLC1Q96QB1 1528 aa3.36□□□□□ -1.87
SMCHD1-203ENST00000577880 ADRA2BP18089 450 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 CALML3P27482 149 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 HMGN5P82970 282 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 MTHFSDQ2M296 383 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 BRINP3Q76B58 766 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 ZNF397Q8NF99 534 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 WDR90Q96KV7 1748 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 SAP30BPQ9UHR5 308 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 HACL1Q9UJ83 578 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 NR2E3Q9Y5X4 410 aa3.35□□□□□ -1.87
SMCHD1-203ENST00000577880 STK24Q9Y6E0 443 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms