RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 CD209Q9NNX6 404 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 C15orf52Q6ZUT6 534 aaKnown RBP13.68□□□□□ -0.22
CALCOCO2-228ENST00000576582 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
CALCOCO2-228ENST00000576582 WNK4Q96J92 1243 aa13.68□□□□□ -0.22
CALCOCO2-228ENST00000576582 KLRK1P26718 216 aa13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 GCKRQ14397 625 aa13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
CALCOCO2-228ENST00000576582 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 IL1R1P14778 569 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 CHRNDQ07001 517 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 ARMC5Q96C12 935 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
CALCOCO2-228ENST00000576582 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 TESPA1A2RU30 521 aaPredicted RBP13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 CASP7P55210 303 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 ZNF804AQ7Z570 1209 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 ANKRD13AQ8IZ07 590 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 CERS5Q8N5B7 392 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 EFCC1Q9HA90 598 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
CALCOCO2-228ENST00000576582 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 SP3Q02447 781 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 CRHR2Q13324 411 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 CFAP100Q494V2 611 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
CALCOCO2-228ENST00000576582 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 RASA3Q14644 834 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 G2E3Q7L622 706 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 IL16Q14005 1332 aa13.63□□□□□ -0.23
CALCOCO2-228ENST00000576582 HTTP42858 3142 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 TAF5LO75529 589 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 FLIIQ13045 1269 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 PTPN18Q99952 460 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 VEZTQ9HBM0 779 aa13.62□□□□□ -0.23
CALCOCO2-228ENST00000576582 F8W031 263 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO2-228ENST00000576582 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.23
CALCOCO2-228ENST00000576582 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
CALCOCO2-228ENST00000576582 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO2-228ENST00000576582 SSC5DA1L4H1 1573 aa13.61□□□□□ -0.23
CALCOCO2-228ENST00000576582 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 SNAP23O00161 211 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 GJA5P36382 358 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 FOXO4P98177 505 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 PCDHAC2Q9Y5I4 1007 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 FAM205AQ6ZU69 1335 aa13.6□□□□□ -0.23
CALCOCO2-228ENST00000576582 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 GTF2A2P52657 109 aa13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 OPTNQ96CV9 577 aa13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 ZFYVE28Q9HCC9 887 aa13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-228ENST00000576582 CENPFP49454 3210 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 TDRD7Q8NHU6 1098 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 CEP290O15078 2479 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 LAMB1P07942 1786 aa13.58□□□□□ -0.24
CALCOCO2-228ENST00000576582 TNNI2P48788 182 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
CALCOCO2-228ENST00000576582 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms