RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 GOLGA6AQ9NYA3 693 aa17.85■□□□□ 0.45
CACNA1A-202ENST00000573710 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
CACNA1A-202ENST00000573710 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
CACNA1A-202ENST00000573710 SLC8A3P57103 927 aa17.85■□□□□ 0.45
CACNA1A-202ENST00000573710 RHOXF2BP0C7M4 288 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 UBASH3AP57075 661 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 RHOXF2Q9BQY4 288 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 GJB2P29033 226 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 ATP2A3Q93084 1043 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 RMDN2Q96LZ7 410 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 CCDC169A6NNP5 214 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 SORBS3O60504 671 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 SYF2O95926 243 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 RPS6KA2Q15349 733 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 GPIHBP1Q8IV16 184 aa17.84■□□□□ 0.45
CACNA1A-202ENST00000573710 BUB1BO60566 1050 aaPredicted RBP17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 CAPN2P17655 700 aa17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 MSANTD4Q8NCY6 345 aa17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 CYP7A1P22680 504 aa17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 PPP2R5AQ15172 486 aa17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-202ENST00000573710 SYNDIG1LA6NDD5 238 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 LDHCP07864 332 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 STX1AQ16623 288 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 RAB3IPQ96QF0 476 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 MX1P20591 662 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 ALDH3A1P30838 453 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 CCT6AP40227 531 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 RSRC1Q96IZ7 334 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 ADCY5O95622 1261 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 LEO1Q8WVC0 666 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 JDP2Q8WYK2 163 aa17.83■□□□□ 0.44
CACNA1A-202ENST00000573710 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 LACTBP83111 547 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 PLCB4Q15147 1175 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 RILPQ96NA2 401 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 USH1CQ9Y6N9 552 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 ESYT2A0FGR8 921 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 WTAPQ15007 396 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 POMGNT1Q8WZA1 660 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 PTPRGP23470 1445 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 GLRX3O76003 335 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 SAT1P21673 171 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 AMOTQ4VCS5 1084 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 FNBP1Q96RU3 617 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 CLUL1Q15846 466 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 SAMD15Q9P1V8 674 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 ORC3Q9UBD5 711 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 NOP56O00567 594 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 SLC4A4Q9Y6R1 1079 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 ERCC6LQ2NKX8 1250 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
CACNA1A-202ENST00000573710 HNRNPCL2B2RXH8 293 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 HNRNPCL1O60812 293 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 CHST3Q7LGC8 479 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 SPDL1Q96EA4 605 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 STMN4Q9H169 189 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 FNDC3AQ9Y2H6 1198 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 RBBP5Q15291 538 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 B4DLN1 442 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 CNGA1P29973 690 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 POTEB2H3BUK9 544 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 GSTO1P78417 241 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 ITKQ08881 620 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 MGARPQ8TDB4 240 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 SAP30BPQ9UHR5 308 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 STK38LQ9Y2H1 464 aa17.81■□□□□ 0.44
CACNA1A-202ENST00000573710 CALCOCO2Q13137 446 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 LRRC27Q9C0I9 530 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 USTQ9Y2C2 406 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 STX10O60499 249 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 KRT19P08727 400 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 TNNI2P48788 182 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 GBP6Q6ZN66 633 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 PPFIBP2Q8ND30 876 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 TTC14Q96N46 770 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 TFCP2L1Q9NZI6 479 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 COG7P83436 770 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 SLC12A1Q13621 1099 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 HMGB1P09429 215 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 BRD3Q15059 726 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 SLC4A1P02730 911 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 NSMCE1Q8WV22 266 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 IVLP07476 585 aa17.8■□□□□ 0.44
CACNA1A-202ENST00000573710 SYKP43405 635 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms