RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 HIBADHP31937 336 aaKnown RBP13.63□□□□□ -0.23
SNX1-212ENST00000560861 ADD2P35612 726 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
SNX1-212ENST00000560861 PTH1RQ03431 593 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 CAVIN4Q5BKX8 364 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
SNX1-212ENST00000560861 KCNB2Q92953 911 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
SNX1-212ENST00000560861 ANO2Q9NQ90 1003 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
SNX1-212ENST00000560861 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 MAST3O60307 1309 aa13.63□□□□□ -0.23
SNX1-212ENST00000560861 TCRBV5S4A2TA0A5A2 114 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 UFL1O94874 794 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 KCNA3P22001 575 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 KCNA4P22459 653 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 HSPA4P34932 840 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 UBE3CQ15386 1083 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
SNX1-212ENST00000560861 OLFM4Q6UX06 510 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 OSBP2Q969R2 916 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
SNX1-212ENST00000560861 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 DENND2AQ9ULE3 1009 aa13.62□□□□□ -0.23
SNX1-212ENST00000560861 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
SNX1-212ENST00000560861 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 PDE6AP16499 860 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
SNX1-212ENST00000560861 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 APPBP2Q92624 585 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX1-212ENST00000560861 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
SNX1-212ENST00000560861 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
SNX1-212ENST00000560861 M0R2C6 588 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 FOXP2O15409 715 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 IL1R1P14778 569 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 DPEP1P16444 411 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 PTGER2P43116 358 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 ANAPC15P60006 121 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 ZSCAN25Q6NSZ9 544 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 CCDC129Q6ZRS4 1044 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 MPNDQ8N594 471 aa13.6□□□□□ -0.23
SNX1-212ENST00000560861 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
SNX1-212ENST00000560861 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
SNX1-212ENST00000560861 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
SNX1-212ENST00000560861 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
SNX1-212ENST00000560861 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
SNX1-212ENST00000560861 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
SNX1-212ENST00000560861 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.231e-8■■■□□ 17.8
SNX1-212ENST00000560861 PUS7LQ9H0K6 701 aaKnown RBP13.59□□□□□ -0.23
SNX1-212ENST00000560861 CD209Q9NNX6 404 aa13.59□□□□□ -0.23
SNX1-212ENST00000560861 PSME4Q14997 1843 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 IGSF3O75054 1194 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
SNX1-212ENST00000560861 POLD1P28340 1107 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 TGFB2P61812 414 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 MAP3K12Q12852 859 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 SLC9C2Q5TAH2 1124 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
SNX1-212ENST00000560861 FAM205AQ6ZU69 1335 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 SCN9AQ15858 1988 aa13.58□□□□□ -0.24
SNX1-212ENST00000560861 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
SNX1-212ENST00000560861 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 SNX21Q969T3 373 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
SNX1-212ENST00000560861 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
SNX1-212ENST00000560861 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 MCCP23508 829 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 RABEP1Q15276 862 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 TMED8Q6PL24 325 aaPredicted RBP13.56□□□□□ -0.24
SNX1-212ENST00000560861 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 TTLL6Q8N841 843 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
SNX1-212ENST00000560861 ARFGEF1Q9Y6D6 1849 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 SLC27A2O14975 620 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 GPAA1O43292 621 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 HSPD1P10809 573 aaKnown RBP13.55□□□□□ -0.24
SNX1-212ENST00000560861 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 CREB3L3Q68CJ9 461 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 ADGRA1Q86SQ6 560 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
SNX1-212ENST00000560861 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms