RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 TTC31Q49AM3 519 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC152Q4G0S7 254 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 FAM83BQ5T0W9 1011 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ARMC4Q5T2S8 1044 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CYP26C1Q6V0L0 522 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 KIAA0825Q8IV33 1275 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 TMEM87AQ8NBN3 555 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANKRD49Q8WVL7 239 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 BICD1Q96G01 975 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 NEK1Q96PY6 1258 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF304Q9HCX3 659 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 C9orf78Q9NZ63 289 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 EPS15L1Q9UBC2 864 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 LINC00854A0A1B0GVQ3 168 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 A6NCN8 305 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 DYNC1I1O14576 645 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NR1I2O75469 434 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ATF3P18847 181 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ATP6V1AP38606 617 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CAP2P40123 477 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RFC5P40937 340 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PLA2G4AP47712 749 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NLRP12P59046 1061 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 LRRC41Q15345 812 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RABL6Q3YEC7 729 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPDYCQ5MJ68 293 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC122Q5T0U0 273 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NEK10Q6ZWH5 1172 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC80Q76M96 950 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 BEND5Q7L4P6 421 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C14orf80Q86SX3 495 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 BRSK1Q8TDC3 778 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 IPCEF1Q8WWN9 437 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF75CPQ92670 426 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NAF1Q96HR8 494 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 DHTKD1Q96HY7 919 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PLEKHA5Q9HAU0 1116 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 TCF7L2Q9NQB0 619 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 KCTD5Q9NXV2 234 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CHMP5Q9NZZ3 219 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 TBC1D7Q9P0N9 293 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PA2G4Q9UQ80 394 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 MORC2Q9Y6X9 1032 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 A0A0B4J203 849 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 C2orf81A6NN90 581 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPTLC2O15270 562 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CLASP2O75122 1294 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SKAP2O75563 359 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 FCHSD2O94868 740 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SASH1O94885 1247 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 GLULP15104 373 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 NDUFV2P19404 249 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 INPP5BP32019 993 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HPDP32754 393 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HSPA4P34932 840 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CSE1LP55060 971 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HSD17B7P56937 341 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RIPK4P57078 832 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 GABPB1Q06547 395 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PDE4BQ07343 736 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 STK3Q13188 491 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CNGA3Q16281 694 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 C10orf76Q5T2E6 689 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANO1Q5XXA6 986 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ISM2Q6H9L7 571 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 FIP1L1Q6UN15 594 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 MMS22LQ6ZRQ5 1243 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PODNQ7Z5L7 613 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SRLQ86TD4 932 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PGBD3Q8N328 593 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF280CQ8ND82 737 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RSAD2Q8WXG1 361 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RNF34Q969K3 372 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 MOGAT1Q96PD6 335 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SH3GL1Q99961 368 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 YIPF2Q9BWQ6 316 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TSPYL2Q9H2G4 693 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms