RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 CASC1Q6TDU7 716 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 GRPEL1Q9HAV7 217 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 MED23Q9ULK4 1368 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 OFD1O75665 1012 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 SNRKQ9NRH2 765 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 PTGER2P43116 358 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 GORABQ5T7V8 394 aa19.62■□□□□ 0.73
PBX1-215ENST00000559240 C7orf43Q8WVR3 580 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 KIF20AO95235 890 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 ZBTB7AO95365 584 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 CHMLP26374 656 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 GPSM2P81274 684 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 CNPY4Q8N129 248 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
PBX1-215ENST00000559240 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
PBX1-215ENST00000559240 TRIM6-TRIM34B2RNG4 842 aa19.6■□□□□ 0.73
PBX1-215ENST00000559240 TMED8Q6PL24 325 aaPredicted RBP19.6■□□□□ 0.73
PBX1-215ENST00000559240 KBTBD3Q8NAB2 608 aa19.6■□□□□ 0.73
PBX1-215ENST00000559240 RTFDC1Q9BY42 306 aaPredicted RBP19.6■□□□□ 0.73
PBX1-215ENST00000559240 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
PBX1-215ENST00000559240 MAST2Q6P0Q8 1798 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 PHKA1P46020 1223 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 CBX1P83916 185 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
PBX1-215ENST00000559240 CAVIN4Q5BKX8 364 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 GNL3LQ9NVN8 582 aaKnown RBP19.59■□□□□ 0.73
PBX1-215ENST00000559240 RAD50Q92878 1312 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 KCNA3P22001 575 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
PBX1-215ENST00000559240 GGA1Q9UJY5 639 aa19.59■□□□□ 0.73
PBX1-215ENST00000559240 MCAMP43121 646 aa19.58■□□□□ 0.73
PBX1-215ENST00000559240 PRPF40BQ6NWY9 871 aaKnown RBP19.58■□□□□ 0.72
PBX1-215ENST00000559240 KCNJ4P48050 445 aa19.58■□□□□ 0.72
PBX1-215ENST00000559240 RILPL2Q969X0 211 aa19.58■□□□□ 0.72
PBX1-215ENST00000559240 CCDC94Q9BW85 323 aaPredicted RBP19.58■□□□□ 0.72
PBX1-215ENST00000559240 LRRFIP1Q32MZ4 808 aaKnown RBP19.57■□□□□ 0.72
PBX1-215ENST00000559240 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.57■□□□□ 0.72
PBX1-215ENST00000559240 TBC1D16Q8TBP0 767 aa19.57■□□□□ 0.72
PBX1-215ENST00000559240 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
PBX1-215ENST00000559240 ARFGEF1Q9Y6D6 1849 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 ATF5Q9Y2D1 282 aaPredicted RBP19.56■□□□□ 0.72
PBX1-215ENST00000559240 CHRNA5P30532 468 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 SCARF1Q14162 830 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.72
PBX1-215ENST00000559240 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 TMX4Q9H1E5 349 aaPredicted RBP19.56■□□□□ 0.72
PBX1-215ENST00000559240 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
PBX1-215ENST00000559240 ZFYP08048 801 aaPredicted RBP19.55■□□□□ 0.72
PBX1-215ENST00000559240 TTLL6Q8N841 843 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 RUFY2Q8WXA3 655 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 ZBTB9Q96C00 473 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
PBX1-215ENST00000559240 SALL1Q9NSC2 1324 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 HIBADHP31937 336 aaKnown RBP19.55■□□□□ 0.72
PBX1-215ENST00000559240 BCAMP50895 628 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 RASGRF1Q13972 1273 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 SOGA3Q5TF21 947 aa19.55■□□□□ 0.72
PBX1-215ENST00000559240 SNAP23O00161 211 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 IL1R1P14778 569 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 MPNDQ8N594 471 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 VPS33BQ9H267 617 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 LETM1O95202 739 aaPredicted RBP19.54■□□□□ 0.72
PBX1-215ENST00000559240 ZNF804AQ7Z570 1209 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 TDRD7Q8NHU6 1098 aaKnown RBP19.54■□□□□ 0.72
PBX1-215ENST00000559240 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 ZNF646O15015 1829 aaPredicted RBP19.54■□□□□ 0.72
PBX1-215ENST00000559240 UFL1O94874 794 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 DPEP1P16444 411 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 ZAP70P43403 619 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 FSD1Q9BTV5 496 aa19.54■□□□□ 0.72
PBX1-215ENST00000559240 GTPBP4Q9BZE4 634 aaKnown RBP19.54■□□□□ 0.72
PBX1-215ENST00000559240 NSFL1CQ9UNZ2 370 aaKnown RBP19.54■□□□□ 0.72
PBX1-215ENST00000559240 PSDA5PKW4 1024 aaPredicted RBP19.53■□□□□ 0.72
PBX1-215ENST00000559240 SGSM2O43147 1006 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 MTERF4Q7Z6M4 381 aaKnown RBP19.53■□□□□ 0.72
PBX1-215ENST00000559240 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
PBX1-215ENST00000559240 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 GOLIM4O00461 696 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 REC8O95072 547 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
PBX1-215ENST00000559240 CYP2E1P05181 493 aaPredicted RBP19.53■□□□□ 0.72
PBX1-215ENST00000559240 GYG1P46976 350 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 EYA3Q99504 573 aa19.53■□□□□ 0.72
PBX1-215ENST00000559240 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.72
PBX1-215ENST00000559240 SEC24BO95487 1268 aa19.52■□□□□ 0.72
PBX1-215ENST00000559240 SUPT20HQ8NEM7 779 aa19.52■□□□□ 0.72
PBX1-215ENST00000559240 PSME4Q14997 1843 aa19.52■□□□□ 0.72
PBX1-215ENST00000559240 KLRK1P26718 216 aa19.52■□□□□ 0.71
PBX1-215ENST00000559240 HELLSQ9NRZ9 838 aa19.52■□□□□ 0.71
PBX1-215ENST00000559240 DIAPH3Q9NSV4 1193 aa19.52■□□□□ 0.71
PBX1-215ENST00000559240 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
PBX1-215ENST00000559240 DPP8Q6V1X1 898 aaPredicted RBP19.51■□□□□ 0.71
PBX1-215ENST00000559240 PSMD1Q99460 953 aa19.51■□□□□ 0.71
PBX1-215ENST00000559240 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
PBX1-215ENST00000559240 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms