RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
CASC4-206ENST00000558847 NFKBIEO00221 500 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PRPF40AO75400 957 aaKnown RBP7.2□□□□□ -1.26
CASC4-206ENST00000558847 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
CASC4-206ENST00000558847 FSTP19883 344 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 DSC3Q14574 896 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PEAR1Q5VY43 1037 aaPredicted RBP7.2□□□□□ -1.26
CASC4-206ENST00000558847 MAP4K3Q8IVH8 894 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PMEPA1Q969W9 287 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 HHIPQ96QV1 700 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 LATS2Q9NRM7 1088 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 DZANK1Q9NVP4 752 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 PPME1Q9Y570 386 aa7.2□□□□□ -1.26
CASC4-206ENST00000558847 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
CASC4-206ENST00000558847 POLR3DP05423 398 aaPredicted RBP7.19□□□□□ -1.26
CASC4-206ENST00000558847 SETDB1Q15047 1291 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 ALG1LQ6GMV1 187 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 DZIP1LQ8IYY4 767 aaKnown RBP7.19□□□□□ -1.26
CASC4-206ENST00000558847 AGGF1Q8N302 714 aaeCLIP7.19□□□□□ -1.26
CASC4-206ENST00000558847 TMEM130Q8N3G9 435 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 ZKSCAN3Q9BRR0 538 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 NIF3L1Q9GZT8 377 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 MUC3BQ9H195 1237 aa7.19□□□□□ -1.26
CASC4-206ENST00000558847 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
CASC4-206ENST00000558847 EDN3P14138 238 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 CDC25BP30305 580 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 SSTR4P31391 388 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 MAPK8P45983 427 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 XPCQ01831 940 aaPredicted RBP7.18□□□□□ -1.26
CASC4-206ENST00000558847 GALNT12Q8IXK2 581 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 CACTIN-AS1Q8N1I8 211 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 DNAJC25Q9H1X3 360 aa7.18□□□□□ -1.26
CASC4-206ENST00000558847 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 LINC01387J3KSC0 135 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 EIF1AYO14602 144 aaKnown RBP7.17□□□□□ -1.26
CASC4-206ENST00000558847 CPNE3O75131 537 aaKnown RBP7.17□□□□□ -1.26
CASC4-206ENST00000558847 TRPA1O75762 1119 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
CASC4-206ENST00000558847 CEP135Q66GS9 1140 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 TXNDC11Q6PKC3 985 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 CSRNP1Q96S65 589 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 MRS2Q9HD23 443 aa7.17□□□□□ -1.26
CASC4-206ENST00000558847 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
CASC4-206ENST00000558847 ENOX2Q16206 610 aaKnown RBP7.16□□□□□ -1.26
CASC4-206ENST00000558847 TMEM102Q8N9M5 508 aaPredicted RBP7.16□□□□□ -1.26
CASC4-206ENST00000558847 POP1Q99575 1024 aaKnown RBP7.16□□□□□ -1.26
CASC4-206ENST00000558847 OSMRQ99650 979 aa7.16□□□□□ -1.26
CASC4-206ENST00000558847 BHLHE41Q9C0J9 482 aaPredicted RBP7.16□□□□□ -1.26
CASC4-206ENST00000558847 PDE2AO00408 941 aaPredicted RBP7.15□□□□□ -1.26
CASC4-206ENST00000558847 TCF3P15923 654 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 CDC27P30260 824 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 FAM117BQ6P1L5 589 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 ACAD11Q709F0 780 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 SLC51AQ86UW1 340 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 NPHS2Q9NP85 383 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 STOML1Q9UBI4 398 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 RAXQ9Y2V3 346 aa7.15□□□□□ -1.26
CASC4-206ENST00000558847 A0A1W2PP55 124 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 TM4SF5O14894 197 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 PTPRAP18433 802 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 EPHA1P21709 976 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 CD68P34810 354 aaPredicted RBP7.14□□□□□ -1.27
CASC4-206ENST00000558847 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
CASC4-206ENST00000558847 NXPE3Q969Y0 559 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 CCDC74AQ96AQ1 378 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 IGSF5Q9NSI5 407 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 SOX13Q9UN79 622 aa7.14□□□□□ -1.27
CASC4-206ENST00000558847 PNMA6FA0A0J9YX94 578 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 GSC2O15499 205 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 DHX15O43143 795 aaKnown RBP7.13□□□□□ -1.27
CASC4-206ENST00000558847 KIAA0319Q5VV43 1072 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 TMC4Q7Z404 712 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 GALNT11Q8NCW6 608 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 TCF12Q99081 682 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 CARD10Q9BWT7 1032 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 CEP41Q9BYV8 373 aa7.13□□□□□ -1.27
CASC4-206ENST00000558847 SORBS3O60504 671 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 PSMD2Q13200 908 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 CCNJLQ8IV13 435 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 UTP4Q969X6 686 aaKnown RBP7.12□□□□□ -1.27
CASC4-206ENST00000558847 UBL7Q96S82 380 aaPredicted RBP7.12□□□□□ -1.27
CASC4-206ENST00000558847 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
CASC4-206ENST00000558847 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
CASC4-206ENST00000558847 PARP2Q9UGN5 583 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
CASC4-206ENST00000558847 METTL12A8MUP2 240 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 GIPC1O14908 333 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 WISP1O95388 367 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 GNA15P30679 374 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 DAB2P98082 770 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 MRPL58Q14197 206 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms