RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 F8W031 263 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 ADORA1P30542 326 aa19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 HIRAP54198 1017 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 KIF4BQ2VIQ3 1234 aa19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 NEUROD6Q96NK8 337 aa19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 AKAP2Q9Y2D5 859 aa19.6■□□□□ 0.73
RABGGTA-206ENST00000558649 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 SASH1O94885 1247 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 TIMM10P62072 90 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 OGFOD1Q8N543 542 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 CERS5Q8N5B7 392 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
RABGGTA-206ENST00000558649 HMMRO75330 724 aa19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 HSPA6P17066 643 aa19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 ZNF280AP59817 542 aaPredicted RBP19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 MFSD14BQ5SR56 506 aa19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 MYOZ2Q9NPC6 264 aa19.58■□□□□ 0.72
RABGGTA-206ENST00000558649 APBB1O00213 710 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 PHKA1P46020 1223 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 CNTROBQ8N137 903 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 HDAC9Q9UKV0 1011 aa19.57■□□□□ 0.72
RABGGTA-206ENST00000558649 FAM205AQ6ZU69 1335 aa19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 COL1A1P02452 1464 aaPredicted RBP19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 GORABQ5T7V8 394 aa19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 XAGE2Q96GT9 111 aa19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 NOP58Q9Y2X3 529 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-206ENST00000558649 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-206ENST00000558649 CCDC102BQ68D86 513 aa19.55■□□□□ 0.72
RABGGTA-206ENST00000558649 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 SCARF1Q14162 830 aa19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 TNNI3KQ59H18 835 aa19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 GGA3Q9NZ52 723 aa19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 FPGT-TNNI3KV9GXZ4 949 aa19.54■□□□□ 0.72
RABGGTA-206ENST00000558649 TRAF5O00463 557 aa19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 ITGBL1O95965 494 aaPredicted RBP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 HTRA3P83110 453 aa19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 FMR1Q06787 632 aaKnown RBP eCLIP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 ZC3H15Q8WU90 426 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 GLIS2Q9BZE0 524 aaPredicted RBP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 TTF2Q9UNY4 1162 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-206ENST00000558649 APLP1P51693 650 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 GRIK5Q16478 980 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 NBPF9Q3BBW0 867 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 HSP90AB4PQ58FF6 505 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 ANGEL2Q5VTE6 544 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 ERC1Q8IUD2 1116 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 TBC1D22AQ8WUA7 517 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 DCPSQ96C86 337 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 ECM29Q5VYK3 1845 aa19.52■□□□□ 0.72
RABGGTA-206ENST00000558649 POLR2AP24928 1970 aaKnown RBP19.52■□□□□ 0.71
RABGGTA-206ENST00000558649 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 GPR108Q9NPR9 543 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 PGAP2Q9UHJ9 254 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 DENND2AQ9ULE3 1009 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 PCDHAC2Q9Y5I4 1007 aa19.51■□□□□ 0.71
RABGGTA-206ENST00000558649 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 ADM5C9JUS6 153 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 WNT10BO00744 389 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 RASGRF1Q13972 1273 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 DLGAP5Q15398 846 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 CFAP100Q494V2 611 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 KRT26Q7Z3Y9 468 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 WDR66Q8TBY9 1149 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 RHPN1Q8TCX5 695 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 DBNDD2Q9BQY9 259 aa19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 CCDC8Q9H0W5 538 aaPredicted RBP19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 TLR7Q9NYK1 1049 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-206ENST00000558649 SEMA3EO15041 775 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 TTC39AQ5SRH9 613 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 AACSQ86V21 672 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
RABGGTA-206ENST00000558649 MMP14P50281 582 aa19.48■□□□□ 0.71
RABGGTA-206ENST00000558649 SULF1Q8IWU6 871 aa19.48■□□□□ 0.71
RABGGTA-206ENST00000558649 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-206ENST00000558649 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
RABGGTA-206ENST00000558649 CCDC158Q5M9N0 1113 aa19.47■□□□□ 0.71
RABGGTA-206ENST00000558649 PI16Q6UXB8 463 aa19.47■□□□□ 0.71
RABGGTA-206ENST00000558649 KIF1BPQ96EK5 621 aa19.47■□□□□ 0.71
RABGGTA-206ENST00000558649 DBNLQ9UJU6 430 aaKnown RBP19.47■□□□□ 0.71
RABGGTA-206ENST00000558649 CLRN2A0PK11 232 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 RAB11FIP3O75154 756 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 ARID4AP29374 1257 aaPredicted RBP19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 PRDX5P30044 214 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 CRKP46108 304 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 IRX6P78412 446 aaPredicted RBP19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 ABCF2Q9UG63 623 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 SERPINA10Q9UK55 444 aa19.46■□□□□ 0.71
RABGGTA-206ENST00000558649 MAST3O60307 1309 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms