RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
SPG11-204ENST00000557866 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 TRIM66O15016 1216 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 SASH1O94885 1247 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 FDX1P10109 184 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 MYT1Q01538 1121 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 HSP90AB4PQ58FF6 505 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 LINC00116Q8NCU8 138 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 COPRSQ9NQ92 184 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 CCDC87Q9NVE4 849 aa9.07□□□□□ -0.96
SPG11-204ENST00000557866 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 CDC45O75419 566 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 MX1P20591 662 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
SPG11-204ENST00000557866 KCNQ4P56696 695 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
SPG11-204ENST00000557866 FOXC1Q12948 553 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
SPG11-204ENST00000557866 LMBR1LQ6UX01 489 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 NLRP10Q86W26 655 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 SEPT12Q8IYM1 358 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 SYNE4Q8N205 404 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
SPG11-204ENST00000557866 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
SPG11-204ENST00000557866 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 TJP1Q07157 1748 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 ARFGEF2Q9Y6D5 1785 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 GPTP24298 496 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 G3BP1Q13283 466 aaKnown RBP eCLIP9.05□□□□□ -0.96
SPG11-204ENST00000557866 OS9Q13438 667 aaPredicted RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 DZIP3Q86Y13 1208 aaKnown RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 ERC1Q8IUD2 1116 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 ZNF34Q8IZ26 560 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 ZBTB38Q8NAP3 1195 aaPredicted RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 SYMPKQ92797 1274 aaKnown RBP9.05□□□□□ -0.96
SPG11-204ENST00000557866 ARXQ96QS3 562 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 SIL1Q9H173 461 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 NUP188Q5SRE5 1749 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 AOX1Q06278 1338 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
SPG11-204ENST00000557866 CAMTA2O94983 1202 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 JUNDP17535 347 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 HSP90AB3PQ58FF7 597 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
SPG11-204ENST00000557866 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 PLA2G12BQ9BX93 195 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 C22orf23Q9BZE7 217 aa9.04□□□□□ -0.96
SPG11-204ENST00000557866 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 C6orf229H3BNL8 230 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 CSF1RP07333 972 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 SMIM5Q71RC9 77 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 PARP9Q8IXQ6 854 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 PCDHGC3Q9UN70 934 aa9.03□□□□□ -0.96
SPG11-204ENST00000557866 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 NDUFV2P19404 249 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 RBM25P49756 843 aaKnown RBP9.02□□□□□ -0.97
SPG11-204ENST00000557866 TFCP2Q12800 502 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 TRIM32Q13049 653 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 ATG9AQ7Z3C6 839 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 AACSQ86V21 672 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 CLASRPQ8N2M8 674 aaKnown RBP9.02□□□□□ -0.97
SPG11-204ENST00000557866 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 CCDC8Q9H0W5 538 aaPredicted RBP9.02□□□□□ -0.97
SPG11-204ENST00000557866 UPF2Q9HAU5 1272 aaKnown RBP9.02□□□□□ -0.97
SPG11-204ENST00000557866 TLR7Q9NYK1 1049 aaKnown RBP9.02□□□□□ -0.97
SPG11-204ENST00000557866 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 CNTNAP4Q9C0A0 1308 aa9.02□□□□□ -0.97
SPG11-204ENST00000557866 RREB1Q92766 1687 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 IRS4O14654 1257 aaPredicted RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 MAP4K4O95819 1239 aaPredicted RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 IFIT2P09913 472 aaKnown RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 CHMLP26374 656 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 LRRC24Q50LG9 513 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 CYP4X1Q8N118 509 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 KIF2CQ99661 725 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 ECHDC1Q9NTX5 307 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 CICQ96RK0 1608 aaPredicted RBP9.01□□□□□ -0.97
SPG11-204ENST00000557866 TTC41PQ6P2S7 1318 aa9.01□□□□□ -0.97
SPG11-204ENST00000557866 SPDYE5A6NIY4 337 aa9□□□□□ -0.97
SPG11-204ENST00000557866 EYA2O00167 538 aa9□□□□□ -0.97
SPG11-204ENST00000557866 GLRX3O76003 335 aaKnown RBP9□□□□□ -0.97
SPG11-204ENST00000557866 GJA5P36382 358 aa9□□□□□ -0.97
SPG11-204ENST00000557866 CTSWP56202 376 aa9□□□□□ -0.97
SPG11-204ENST00000557866 TNNI3KQ59H18 835 aa9□□□□□ -0.97
SPG11-204ENST00000557866 TTLL11Q8NHH1 800 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms