RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SHTN1A0MZ66 631 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 EIF4A2Q14240 407 aaKnown RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 MICALCLQ6ZW33 695 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 MCM4P33991 863 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 GRPEL1Q9HAV7 217 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 RNMTO43148 476 aaKnown RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 BRAPQ7Z569 592 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 HELLSQ9NRZ9 838 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 BACH1O14867 736 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 FAM177A1Q8N128 213 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 MROH5Q6ZUA9 1318 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 TEX11Q8IYF3 940 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 ANKRD44Q8N8A2 993 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 CCDC77Q9BR77 488 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 SLAIN2Q9P270 581 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 MAPKBP1O60336 1514 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 UFL1O94874 794 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 COL17A1Q9UMD9 1497 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 KDM5AP29375 1690 aaKnown RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 ZBED4O75132 1171 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 HIBADHP31937 336 aaKnown RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 TMCO3Q6UWJ1 677 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 CSADQ9Y600 493 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 TMCO5BA8MYB1 307 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 GJB2P29033 226 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 RRAGBQ5VZM2 374 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 KIFAP3Q92845 792 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 RTEL1Q9NZ71 1219 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 RTL1A6NKG5 1358 aa9.48□□□□□ -0.89
CHD8-213ENST00000557364 IBTKQ9P2D0 1353 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 POLR3GO15318 223 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
CHD8-213ENST00000557364 DNM2P50570 870 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 FERMT3Q86UX7 667 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 CCDC65Q8IXS2 484 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 FRMD4BQ9Y2L6 1034 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
CHD8-213ENST00000557364 ZNF354CQ86Y25 554 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 NDC80O14777 642 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 ATP2A2P16615 1042 aaKnown RBP9.47□□□□□ -0.89
CHD8-213ENST00000557364 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
CHD8-213ENST00000557364 CNKSR1Q969H4 720 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 HOXC9P31274 260 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 MAGEB6Q8N7X4 407 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 DTHD1Q6ZMT9 781 aa9.47□□□□□ -0.89
CHD8-213ENST00000557364 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
CHD8-213ENST00000557364 AKR1B10O60218 316 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 SPECC1Q5M775 1068 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 TMEM87BQ96K49 555 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 DISP3Q9P2K9 1392 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 N4BP3O15049 544 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 PLCD1P51178 756 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 NOX5Q96PH1 765 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 IQCGQ9H095 443 aaKnown RBP9.46□□□□□ -0.89
CHD8-213ENST00000557364 HAND2P61296 217 aa9.46□□□□□ -0.89
CHD8-213ENST00000557364 WDR44Q5JSH3 913 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 RAB3IL1Q8TBN0 382 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 TSPOAP1O95153 1857 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 NR1I2O75469 434 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 ASIC1P78348 528 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 PPP1R14CQ8TAE6 165 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 NOC2LQ9Y3T9 749 aaKnown RBP9.46□□□□□ -0.9
CHD8-213ENST00000557364 NUCB1Q02818 461 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 ZNF790Q6PG37 636 aa9.46□□□□□ -0.9
CHD8-213ENST00000557364 IRX3P78415 501 aaPredicted RBP9.45□□□□□ -0.9
CHD8-213ENST00000557364 AZI2Q9H6S1 392 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 CCDC175P0C221 793 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 METTL22Q9BUU2 404 aaPredicted RBP9.45□□□□□ -0.9
CHD8-213ENST00000557364 KRT83P78385 493 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 VWA3BQ502W6 1294 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 AOX1Q06278 1338 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 APBA3O96018 575 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 VIMP08670 466 aaKnown RBP9.45□□□□□ -0.9
CHD8-213ENST00000557364 CAMK4Q16566 473 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 CCDC113Q9H0I3 377 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 GPR162Q16538 588 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 STRN3Q13033 797 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 IWS1Q96ST2 819 aa9.45□□□□□ -0.9
CHD8-213ENST00000557364 TRIM6Q9C030 488 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms