RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 SLX4Q8IY92 1834 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 GABBR2O75899 941 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 PRPF40BQ6NWY9 871 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 ZNF804AQ7Z570 1209 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 MPNDQ8N594 471 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 GPR101Q96P66 508 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 MYH7P12883 1935 aa11.66□□□□□ -0.54
HNRNPC-220ENST00000555585 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 RNF113AO15541 343 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 SGSM2O43147 1006 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 DPEP1P16444 411 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 ANP32AP39687 249 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 OLFM4Q6UX06 510 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 TXNRD3Q86VQ6 643 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 TBC1D32Q96NH3 1257 aa11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 PIH1D3Q9NQM4 214 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 MYO5AQ9Y4I1 1855 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-220ENST00000555585 RAD50Q92878 1312 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 A0A0D9SFI3 127 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 SEMA3EO15041 775 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 IDH1O75874 414 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 ZFYP08048 801 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 C15orf52Q6ZUT6 534 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 IL25Q9H293 177 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 POLLQ9UGP5 575 aa11.64□□□□□ -0.55
HNRNPC-220ENST00000555585 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 IRS2Q9Y4H2 1338 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 CHGBP05060 677 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 MCCP23508 829 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 TGFB2P61812 414 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 EYA3Q99504 573 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 HELLSQ9NRZ9 838 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
HNRNPC-220ENST00000555585 G3V3G9 751 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 ZMYM1Q5SVZ6 1142 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 ZC3H12CQ9C0D7 883 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 ABCF2Q9UG63 623 aa11.62□□□□□ -0.55
HNRNPC-220ENST00000555585 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 C21orf2O43822 256 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 KCNA3P22001 575 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 ADD2P35612 726 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 CCDC129Q6ZRS4 1044 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 APPBP2Q92624 585 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 LSG1Q9H089 658 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 COL1A1P02452 1464 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 DUOX1Q9NRD9 1551 aa11.61□□□□□ -0.55
HNRNPC-220ENST00000555585 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 M0R2C6 588 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 EPB41L2O43491 1005 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 PDE6AP16499 860 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 PTGER2P43116 358 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 PTH1RQ03431 593 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 MAGEB6Q8N7X4 407 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
HNRNPC-220ENST00000555585 SPON1Q9HCB6 807 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms