RNA–Protein interactions for RNA: ENST00000553653.5

SLCO3A1-204, Transcript of solute carrier organic anion transporter family member 3A1, humanhuman

TSL 5

Gene SLCO3A1, Length 2,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO3A1-204ENST00000553653 GOLGA6L3A6NEY3 463 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 STK3Q13188 491 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 ZPR1O75312 459 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 F13A1P00488 732 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 BRF1Q92994 677 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 GTF3C6Q969F1 213 aa28.34■■■□□ 2.13
SLCO3A1-204ENST00000553653 WTIPA6NIX2 430 aaPredicted RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 FOXD4L6Q3SYB3 417 aaPredicted RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 FOXD4L3Q6VB84 417 aaPredicted RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 GAS2L3Q86XJ1 694 aa28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 ANKRD18AQ8IVF6 992 aa28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 SETDB2Q96T68 719 aa28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 LRRC4BQ9NT99 713 aa28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 NSFL1CQ9UNZ2 370 aaKnown RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 CELF1Q92879 486 aaKnown RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 BSDC1Q9NW68 430 aaPredicted RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 CTNNA3Q9UI47 895 aa28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 TNRC6CQ9HCJ0 1690 aaKnown RBP28.33■■■□□ 2.13
SLCO3A1-204ENST00000553653 BRWD3Q6RI45 1802 aa28.32■■■□□ 2.12
SLCO3A1-204ENST00000553653 NYXQ9GZU5 481 aa28.32■■■□□ 2.12
SLCO3A1-204ENST00000553653 HAND2P61296 217 aa28.31■■■□□ 2.12
SLCO3A1-204ENST00000553653 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
SLCO3A1-204ENST00000553653 L1TD1Q5T7N2 865 aaKnown RBP28.31■■■□□ 2.12
SLCO3A1-204ENST00000553653 NBPF5PQ86XG9 351 aaPredicted RBP28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 UBR3Q6ZT12 1888 aa28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 ZNF804BA4D1E1 1349 aa28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 GTF2E1P29083 439 aaPredicted RBP28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 IMMTQ16891 758 aaKnown RBP28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 GDPD2Q9HCC8 539 aa28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 MINPP1Q9UNW1 487 aa28.3■■■□□ 2.12
SLCO3A1-204ENST00000553653 XRCC6P12956 609 aaKnown RBP eCLIP28.29■■■□□ 2.12
SLCO3A1-204ENST00000553653 CAVIN1Q6NZI2 390 aaKnown RBP28.29■■■□□ 2.12
SLCO3A1-204ENST00000553653 CCDC24Q8N4L8 307 aa28.29■■■□□ 2.12
SLCO3A1-204ENST00000553653 NBPF3Q9H094 633 aa28.29■■■□□ 2.12
SLCO3A1-204ENST00000553653 QTRT2Q9H974 415 aaKnown RBP28.29■■■□□ 2.12
SLCO3A1-204ENST00000553653 SCRN1Q12765 414 aa28.28■■■□□ 2.12
SLCO3A1-204ENST00000553653 FAM196AQ6ZSG2 479 aa28.28■■■□□ 2.12
SLCO3A1-204ENST00000553653 COL1A1P02452 1464 aaPredicted RBP28.28■■■□□ 2.12
SLCO3A1-204ENST00000553653 CHST3Q7LGC8 479 aa28.28■■■□□ 2.12
SLCO3A1-204ENST00000553653 EP400Q96L91 3159 aa28.28■■■□□ 2.12
SLCO3A1-204ENST00000553653 JAK2O60674 1132 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 PFKFB2O60825 505 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 PHF14O94880 888 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 APOBRQ0VD83 1088 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 TMEM87AQ8NBN3 555 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 BRPF3Q9ULD4 1205 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 CNPY2Q9Y2B0 182 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 NCLP19338 710 aaKnown RBP28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 FBXL16Q8N461 479 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 MAGEB6Q8N7X4 407 aa28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 STRBPQ96SI9 672 aaKnown RBP28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 RBM27Q9P2N5 1060 aaKnown RBP28.27■■■□□ 2.12
SLCO3A1-204ENST00000553653 LARP1BQ659C4 914 aaKnown RBP28.26■■■□□ 2.11
SLCO3A1-204ENST00000553653 USP48Q86UV5 1035 aa28.26■■■□□ 2.11
SLCO3A1-204ENST00000553653 MB21D2Q8IYB1 491 aaPredicted RBP28.26■■■□□ 2.11
SLCO3A1-204ENST00000553653 UBE4AQ14139 1066 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 TRAPPC3LQ5T215 181 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 CDC37L1Q7L3B6 337 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 NLRP3Q96P20 1036 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 ISY1Q9ULR0 285 aaKnown RBP28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 VPS37CA5D8V6 355 aaPredicted RBP28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 GADD45BO75293 160 aaPredicted RBP28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 TM4SF1P30408 202 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 GYG1P46976 350 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 TPTE2Q6XPS3 522 aa28.25■■■□□ 2.11
SLCO3A1-204ENST00000553653 MAP3K12Q12852 859 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 ZSCAN23Q3MJ62 389 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 GPHNQ9NQX3 736 aaPredicted RBP28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 RFC4P35249 363 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 ANTXR2P58335 489 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 FGD1P98174 961 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 SMARCC2Q8TAQ2 1214 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 TMEM63CQ9P1W3 806 aa28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 IQSEC3Q9UPP2 1182 aaPredicted RBP28.24■■■□□ 2.11
SLCO3A1-204ENST00000553653 NKX2-3Q8TAU0 364 aa28.23■■■□□ 2.11
SLCO3A1-204ENST00000553653 ZNF213O14771 459 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 CTDNEP1O95476 244 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 ZNF445P59923 1031 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 RPS8P62241 208 aaKnown RBP28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 TBC1D10CQ8IV04 446 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 EPB41L4AQ9HCS5 686 aaPredicted RBP28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 MBD3O95983 291 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 EVCP57679 992 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 NFIXQ14938 502 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 AIDAQ96BJ3 306 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 GRPEL1Q9HAV7 217 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 DENND2AQ9ULE3 1009 aa28.22■■■□□ 2.11
SLCO3A1-204ENST00000553653 MBD4O95243 580 aa28.21■■■□□ 2.11
SLCO3A1-204ENST00000553653 PDCP20941 246 aa28.21■■■□□ 2.11
SLCO3A1-204ENST00000553653 MRE11P49959 708 aa28.21■■■□□ 2.11
SLCO3A1-204ENST00000553653 NSUN7Q8NE18 718 aaKnown RBP28.21■■■□□ 2.11
SLCO3A1-204ENST00000553653 CACNA1SQ13698 1873 aa28.21■■■□□ 2.11
SLCO3A1-204ENST00000553653 CARMIL3Q8ND23 1372 aa28.2■■■□□ 2.11
SLCO3A1-204ENST00000553653 KLRK1P26718 216 aa28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 PDIA3P30101 505 aaKnown RBP28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 DNM1Q05193 864 aaKnown RBP28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 ALX1Q15699 326 aa28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 FAM84BQ96KN1 310 aaPredicted RBP28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 PANK2Q9BZ23 570 aa28.2■■■□□ 2.1
SLCO3A1-204ENST00000553653 ARMT1Q9H993 441 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms